Gene Sfum_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0239 
Symbol 
ID4461315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp279792 
End bp280568 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content62% 
IMG OID639700994 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_844375 
Protein GI116747688 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.577245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.289646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGATGC AGCCGTATTC TGAGAGTCGC CCCAATGAGG CGAGCTTCAC CGTGGCGAGT 
TACAATACTC ACCGCTGCGT GGGTATTGAC CGAAAATACG ATCCGGAGCG CACAGCCCGG
GTGATTCGCG AGCTGGACGC GGACATAATC GGTCTTCAGG AGATAGACGC GGGGTTCTAC
CGGTCGCAGG GTTCCAGGCA GCTGGAACGG CTGGCCGACG CGACGGGACT CAATGTGGTG
AACGGTCCGA CGAAAAGAGG TACCGGCGGT CACTACGGAA ATGTCCTGCT CACATCCCGC
AAGGTCGTCG GAGTGCGGCG GATCGATCTG AGCGTCTACG GTCGCGAACC CCGAGGCGCC
ATCGACGTGG ACCTGGACGT TGACGGCGAA ATCGTGAGGG TGATGGTCGT GCACCTCGGC
CTCGGCGGGC TCGAGCGCCG CAGGCAGGTG AACCGACTGC TGCACGGGTG CTCCTCGGAG
CAAGAACAGT TGCACGTCGT CCTGGGAGAC ATCAACGAAT GGTTTCCCCT GGGACGGCCG
TTGCACCGGC TTCATCGGCA TTTCGGGAAA TCCCCGGCGC GCCGCACGTT CCCTTCGTTT
CTTCCGGTCC TGGCGCTGGA CCGGATCTGG GTGAAACCGC TGGACGCCCT GATGGAAATC
AGCGTTCACG ATACCGTTCT GAGCCGGGTG GCCTCGGACC ACCTGCCGAT CAAGGCCACC
ATCACCAGGA TGGATGCAAC GGCCGCATGT GCCGGTTCTT TGTCCGGAGT CAAATGA
 
Protein sequence
MTMQPYSESR PNEASFTVAS YNTHRCVGID RKYDPERTAR VIRELDADII GLQEIDAGFY 
RSQGSRQLER LADATGLNVV NGPTKRGTGG HYGNVLLTSR KVVGVRRIDL SVYGREPRGA
IDVDLDVDGE IVRVMVVHLG LGGLERRRQV NRLLHGCSSE QEQLHVVLGD INEWFPLGRP
LHRLHRHFGK SPARRTFPSF LPVLALDRIW VKPLDALMEI SVHDTVLSRV ASDHLPIKAT
ITRMDATAAC AGSLSGVK