Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0239 |
Symbol | |
ID | 4461315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 279792 |
End bp | 280568 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639700994 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_844375 |
Protein GI | 116747688 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.577245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.289646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGATGC AGCCGTATTC TGAGAGTCGC CCCAATGAGG CGAGCTTCAC CGTGGCGAGT TACAATACTC ACCGCTGCGT GGGTATTGAC CGAAAATACG ATCCGGAGCG CACAGCCCGG GTGATTCGCG AGCTGGACGC GGACATAATC GGTCTTCAGG AGATAGACGC GGGGTTCTAC CGGTCGCAGG GTTCCAGGCA GCTGGAACGG CTGGCCGACG CGACGGGACT CAATGTGGTG AACGGTCCGA CGAAAAGAGG TACCGGCGGT CACTACGGAA ATGTCCTGCT CACATCCCGC AAGGTCGTCG GAGTGCGGCG GATCGATCTG AGCGTCTACG GTCGCGAACC CCGAGGCGCC ATCGACGTGG ACCTGGACGT TGACGGCGAA ATCGTGAGGG TGATGGTCGT GCACCTCGGC CTCGGCGGGC TCGAGCGCCG CAGGCAGGTG AACCGACTGC TGCACGGGTG CTCCTCGGAG CAAGAACAGT TGCACGTCGT CCTGGGAGAC ATCAACGAAT GGTTTCCCCT GGGACGGCCG TTGCACCGGC TTCATCGGCA TTTCGGGAAA TCCCCGGCGC GCCGCACGTT CCCTTCGTTT CTTCCGGTCC TGGCGCTGGA CCGGATCTGG GTGAAACCGC TGGACGCCCT GATGGAAATC AGCGTTCACG ATACCGTTCT GAGCCGGGTG GCCTCGGACC ACCTGCCGAT CAAGGCCACC ATCACCAGGA TGGATGCAAC GGCCGCATGT GCCGGTTCTT TGTCCGGAGT CAAATGA
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Protein sequence | MTMQPYSESR PNEASFTVAS YNTHRCVGID RKYDPERTAR VIRELDADII GLQEIDAGFY RSQGSRQLER LADATGLNVV NGPTKRGTGG HYGNVLLTSR KVVGVRRIDL SVYGREPRGA IDVDLDVDGE IVRVMVVHLG LGGLERRRQV NRLLHGCSSE QEQLHVVLGD INEWFPLGRP LHRLHRHFGK SPARRTFPSF LPVLALDRIW VKPLDALMEI SVHDTVLSRV ASDHLPIKAT ITRMDATAAC AGSLSGVK
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