| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3562 |
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| Symbol | |
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| ID | 4280455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4231797 |
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| End bp | 4232525 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638136374 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_752228 |
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| Protein GI | 114564714 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTATGT ATTGGCGTCA GTTCATGCCC AGAGTGGGAA CGCGTAAGCT TTATCAACTC
ATCAAGCCAC AGTTACTTAA ACAAGGCATA AAGCTAGGTA GGGACGGCCT ATTTCGGTAT
TTGAAACAAC ACAATATGTT AGTAAAGCCT AGGAAGAATT ACACCAAGAC AACCCATAGC
CATCATTGGT TGAGAAAACA CCCAAACTTA CTCAAAGACA GAGTGGTGAA GGGGGTTGAA
GAGGTGTTTG TCAGTGACAT AACCTACGTA AAATCAGACG AAGGAACTCA CTATTTATCA
TTAGTCACAG ATGCATATTC AAGAAAAATA ATGGGTTATG AATTAAGTGA TGAAATGAAA
GCCTGTGATG TCGTTAAAGC ATTGGAGATG ACGATAAAGA ATCGTCAGAC AACCAGTGAT
GTCATTCATC ATTCAGATAG AGGGATACAG TACTGCTCAG CAGAATATCA ACATAAATTG
GCTGCGAATG CGATAAGGCC ATCGATGACA GATGGGTATG ATTGTTATCA GAATGCGTTA
GCTGAGCGAG TGAATGGTAT TTTGAAGCAA GAGTTTTTAC TTTACCGCTG TCGTACGATG
AAGGAGCTGG CAATACTCAC CAAAGAATCG ATTAGGACTT ATAACGAGTT AAGACCGCAC
CTTAGTTTAG GAATGAAAAC CCCAAACGAA GTGCATGAAA AAGCCAGTCG GGAGTTCCAA
CTGGCTTAA
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| Protein sequence | MVMYWRQFMP RVGTRKLYQL IKPQLLKQGI KLGRDGLFRY LKQHNMLVKP RKNYTKTTHS
HHWLRKHPNL LKDRVVKGVE EVFVSDITYV KSDEGTHYLS LVTDAYSRKI MGYELSDEMK
ACDVVKALEM TIKNRQTTSD VIHHSDRGIQ YCSAEYQHKL AANAIRPSMT DGYDCYQNAL
AERVNGILKQ EFLLYRCRTM KELAILTKES IRTYNELRPH LSLGMKTPNE VHEKASREFQ
LA
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