| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2599 |
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| Symbol | cysS |
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| ID | 4279506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3109182 |
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| End bp | 3110564 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135395 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_751278 |
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| Protein GI | 114563765 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00582653 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAAAGA TTTACAATAG TATTAGCCGT GATAAACAAG AATTTAAACC AATAAATCCA
GGTAAAATCG GAATGTACGT CTGTGGCGTA ACCATTTACG ATTTATGTCA TATTGGTCAT
GGGCGTACCT TTGTTTCGTT TGACATGATA GTGCGTTATT TACGTTATAT CGGTTATGAG
GTGAATTTTC AGCGCAACAT TACCGATGTT GATGACAAAA TTATCAAACG GGCGGCTGAA
AACAACGAAT CTTGTGAGTC GCTAACTGAG CGTTTGATCG CCGAAATGCA CCAAGATTTT
GATGCCTTGA ACATGAAACG TCCAGATTTT GAGCCTCGAG CAACGTTACA TATTGAAGAA
ATTATCGATA TGGTTCAGCG TTTACTCGAT CGCGATCATG CTTACGTAGC CAGTAATGGG
GATGTATTAT TTAGCGTTGC ATCATTCCCT GAGTACGGAC AGTTGTCAGG TCAAAACCTA
GACCAGCTTC AAGCCGGTGC TCGCGTTGAG ATAGATAATG CTAAACGCAA TCCTATGGAT
TTTGTGTTAT GGAAAATGTC TAAACCGGGT GAACCAACGT GGGAATCACC TTGGGGACCA
GGTCGCCCAG GTTGGCACAT TGAGTGTTCA GCCATGAACA GTAAACATCT AGGTTTACAC
TTTGACATTC ATGGTGGCGG GTCTGATTTA CAGTTTCCAC ATCATGAAAA TGAAATTGCA
CAGTCTTGCT GTGCTCACGA TACCCCGTAT GTTAATTACT GGATGCACAC CGGAATGGTG
ATGGTTGACC GTGAAAAAAT GTCTAAATCA CTGGACAATT TTTTTACCAT TCGAGATGTG
CTTAAGCATT ATGATGCTGA AACTGTACGT TACTTCTTAT TATCTGGTCA TTATCGTAGT
CAGTTAAATT ATTCTGAAGA CAATTTAAAG CAAGCTCGTG CAGCGCTAGA GCGTTTATAC
ACTGCGCTTA AAGGTTTAGA CTTAACAGTT GATGCTGCGC CTGCTGAAGC GTTTGTAGCC
AAGTTTAAGT CGGCAATGGA TGATGACTTT AATACTCCTG AAGCCTATTC CGTGTTATTT
GAGATGGTAC GTGAAATCAA TCGTCTTAAA ACAACCGATA TGGCAGAGGC ATCGGCATTA
GGTGTCAGCT TGAAGCAATT AGCAGATGTG CTTGGCCTTA TCAGCCAGAC GCCAGAAGCT
TTCTTTAAGG GGGAGGGCAG TGACGATGAA GTGGCAGAAA TTGAAGCGCT TATCGTTGAG
CGTAACCGTG CCCGTACTGA AAAAGATTGG CCAGCAGCGG ATGTGGCCCG CGATCGCTTA
AACGAGTTAG GCGTTGAGTT AGAAGATGGC GGCCCTAGCG GCACGACATG GCGTAAAAAG
TAG
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| Protein sequence | MLKIYNSISR DKQEFKPINP GKIGMYVCGV TIYDLCHIGH GRTFVSFDMI VRYLRYIGYE
VNFQRNITDV DDKIIKRAAE NNESCESLTE RLIAEMHQDF DALNMKRPDF EPRATLHIEE
IIDMVQRLLD RDHAYVASNG DVLFSVASFP EYGQLSGQNL DQLQAGARVE IDNAKRNPMD
FVLWKMSKPG EPTWESPWGP GRPGWHIECS AMNSKHLGLH FDIHGGGSDL QFPHHENEIA
QSCCAHDTPY VNYWMHTGMV MVDREKMSKS LDNFFTIRDV LKHYDAETVR YFLLSGHYRS
QLNYSEDNLK QARAALERLY TALKGLDLTV DAAPAEAFVA KFKSAMDDDF NTPEAYSVLF
EMVREINRLK TTDMAEASAL GVSLKQLADV LGLISQTPEA FFKGEGSDDE VAEIEALIVE
RNRARTEKDW PAADVARDRL NELGVELEDG GPSGTTWRKK
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