Gene SeSA_A4098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4098 
Symbol 
ID6518257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3972574 
End bp3973572 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content53% 
IMG OID642749067 
Producttranscriptional repressor RbsR 
Protein accessionYP_002116829 
Protein GI194737791 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.396512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTACTA TGAAAGATGT TGCCCGCCTG GCGGGAGTCT CTACATCGAC GGTCTCTCAC 
GTTATTAACA AAGATCGCTT TGTGAGTGAG ACGATAACCG AAAAAGTTGA AGCGGCGATT 
AAATCACTTA ACTATGCGCC TTCCGCGCTG GCGCGAAGCC TCAAGTTAAA CCAGACCCGC 
ACGATTGGTA TGCTAATTAC CGCCAGTACC AACCCTTTTT ATTCCGAACT GGTGCGCGGC 
GTTGAGCGAA GCTGTTTTGA GCGCGGTTAT AGTCTGGTGC TGTGCAATAC CGAAGGCGAC 
GAGCAACGGA TGAACCGTAA CCTGGAGACG CTGATGCAAA AACGGGTAGA CGGTTTACTG 
CTGCTGTGTA CCGAAACGCA TCAGCCTTCT CGGGAAATCA TGGAGCGTTA TCCGTCTATT 
CCTACCGTCA TGATGGACTG GTCGCCGTTT GATGGTGAGG GCGATAGCGA TCTCATTCAG 
GATAATTCGT TGTTAGGCGG CGATCTTGCG ACCCAACACC TTATCGATAA AGGATTTACC 
CGAATAGCCT GTATTACCGG CCCGCTGGAC AAAACGCCAG CGCGTTTGCG GCTGGAAGGG 
TATCGGGCGG CGATGAAACG CGCAGGGCTG GTTATTCCGC AAGGCTATGA GATCACCGGC 
GATTTTGAAT TTGGCGGCGG CTTTGACGCC ATGCAGGCGT TACTCGCCCA TCAACAGCGA 
CCGCAAGCGG TTTTTACCGG AAACGATGCG ATGGCTGTCG GCGCCTATCA GGCGCTATAT 
CAGGCGGGGC TTCGTATTCC GCAGGATATG GCGGTCATTG GCTATGATGA TATTGAGCTG 
GCGCGCTATA TGACGCCGCC GCTGACGACT ATCCATCAGC CGAAAGATGA ATTGGGCGAG 
CTGGCTATTG ATGTGTTGAT TCATCGGATG GCGCAGCCCG CCTTGCAACA ACAGCGACTT 
CAGCTTACTC CGGTTTTGAC GGTGCGTGGG TCGGTTTAG
 
Protein sequence
MATMKDVARL AGVSTSTVSH VINKDRFVSE TITEKVEAAI KSLNYAPSAL ARSLKLNQTR 
TIGMLITAST NPFYSELVRG VERSCFERGY SLVLCNTEGD EQRMNRNLET LMQKRVDGLL 
LLCTETHQPS REIMERYPSI PTVMMDWSPF DGEGDSDLIQ DNSLLGGDLA TQHLIDKGFT 
RIACITGPLD KTPARLRLEG YRAAMKRAGL VIPQGYEITG DFEFGGGFDA MQALLAHQQR 
PQAVFTGNDA MAVGAYQALY QAGLRIPQDM AVIGYDDIEL ARYMTPPLTT IHQPKDELGE 
LAIDVLIHRM AQPALQQQRL QLTPVLTVRG SV