Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3932 |
Symbol | pyrE |
ID | 6515369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 3802045 |
End bp | 3802686 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642748904 |
Product | orotate phosphoribosyltransferase |
Protein accession | YP_002116667 |
Protein GI | 194736098 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0461] Orotate phosphoribosyltransferase |
TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0874196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000146436 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACCGT ATCAGCGCCA GTTTATTGAG TTTGCGCTTA ACAAGCAGGT ACTAAAGTTT GGCGAGTTTA CGCTGAAATC CGGGCGCAAA AGCCCCTATT TCTTCAATGC CGGGCTGTTT AATACCGGGC GCGACCTGGC GTTGTTAGGC CGTTTTTATG CCGAAGCGCT GGTGGATTCC GGTATTGAAT TTGATCTGCT GTTTGGCCCC GCATACAAAG GTATTCCGAT CGCGACGACG ACGGCGGTTG CGCTGGCGGA ACATCACGAT AAAGACCTGC CGTACTGCTT TAACCGCAAA GAGGCAAAAG ATCATGGCGA AGGCGGGAGT CTGGTGGGCA GCGCGCTACA GGGCCGCGTG ATGCTGGTGG ATGACGTGAT TACCGCAGGT ACGGCGATTC GCGAGTCGAT GGAGATTATT CAGGCGCACG GGGCTACACT GGCTGGCGTA CTGATTTCGC TGGATCGTCA GGAACGTGGC CGCGGCGAGA TTTCCGCGAT TCAGGAAGTG GAGCGCGACT ATGGTTGTAA GGTTATCTCC ATCATTACGC TGAAAGACCT GATTGCCTAT CTGGAAGAAA AACCTGATAT GGCTGAGCAT CTGGCGGCTG TGCGAGCATA CCGGGAAGAA TTTGGCGTGT AA
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Protein sequence | MKPYQRQFIE FALNKQVLKF GEFTLKSGRK SPYFFNAGLF NTGRDLALLG RFYAEALVDS GIEFDLLFGP AYKGIPIATT TAVALAEHHD KDLPYCFNRK EAKDHGEGGS LVGSALQGRV MLVDDVITAG TAIRESMEII QAHGATLAGV LISLDRQERG RGEISAIQEV ERDYGCKVIS IITLKDLIAY LEEKPDMAEH LAAVRAYREE FGV
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