Gene SeSA_A2687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2687 
SymbolhemF 
ID6515943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp2563453 
End bp2564352 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content57% 
IMG OID642747733 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_002115518 
Protein GI194737732 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0408] Coproporphyrinogen III oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.143173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCG ATGCACATCA CGTAAAACAG TTTCTGCTAC GCCTGCAGGA TGATATTTGC 
CAAAAGTTAT CCGCTGCGGA TGGCGCAAAC TTTGTCGAAG ATAGCTGGCG ACGCGAAGCG 
GGCGGCGGCG GACGCAGCCG GGTATTACGC AACGGCGGGA TTTTCGAACA GGCGGGCGTT 
AATTTCTCTC ACGTTCACGG CGATGCAATG CCCGCGTCCG CCACCGCGCA TCGGCCAGAA 
CTGGCCGGGC GTAGTTTTGA AGCGATGGGC GTATCGCTGG TGGTGCATCC GCACAATCCG 
TATATTCCCA CCAGCCATGC TAACGTGCGC TTTTTTATTG CCGAAAAACC GGGCGCCGAT 
CCGGTGTGGT GGTTTGGCGG CGGGTTCGAT TTAACGCCCT ACTACGGCTT TGAAGAGGAT 
GCCGTTCACT GGCACCGCAC CGCCCGCGAC CTGTGCCAGC CGTTTGGCGA CGATGTGTAT 
CCGCGTTATA AAAAGTGGTG CGACGACTAC TTTTTCCTCA AGCATCGTAA CGAGCAGCGC 
GGCGTTGGCG GCCTTTTTTT TGACGATTTG AATACGCCGG ATTTCGACCA CTGTTTTGCT 
TTTATGCAGG CGGTCGGTAA CGGCTACACC CAGGCGTATT TACCGATTGT CGAACGACGC 
AAAGCGATGG TCTGGGGCGA GCGGGAGCGT AATTTTCAAC TTTATCGCCG CGGGCGCTAC 
GTGGAGTTCA ACCTGGTGTG GGACAGAGGC ACCCTGTTTG GTCTGCAAAC CGGCGGGCGC 
ACTGAATCTA TCCTGATGTC GATGCCGCCG CTGGTGCGCT GGGAGTACGA CTGGCAGCCA 
GAAGCGGGTA GCCCGGAAGC GGCGCTGAGC GAGTTTATTC AGGTACGCGA CTGGGTGTAA
 
Protein sequence
MKPDAHHVKQ FLLRLQDDIC QKLSAADGAN FVEDSWRREA GGGGRSRVLR NGGIFEQAGV 
NFSHVHGDAM PASATAHRPE LAGRSFEAMG VSLVVHPHNP YIPTSHANVR FFIAEKPGAD 
PVWWFGGGFD LTPYYGFEED AVHWHRTARD LCQPFGDDVY PRYKKWCDDY FFLKHRNEQR 
GVGGLFFDDL NTPDFDHCFA FMQAVGNGYT QAYLPIVERR KAMVWGERER NFQLYRRGRY 
VEFNLVWDRG TLFGLQTGGR TESILMSMPP LVRWEYDWQP EAGSPEAALS EFIQVRDWV