Gene SeSA_A1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1959 
Symbolrnd 
ID6515803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1892030 
End bp1893157 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content56% 
IMG OID642747050 
Productribonuclease D 
Protein accessionYP_002114851 
Protein GI194734944 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID[TIGR01388] ribonuclease D 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000313579 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATTACC AAATGATTGA AACGGACGAT GCGCTGGCGA GCCTGTGTGA GGCTGTCCGC 
GCATGTCCGG CTATTGCTTT AGATACGGAA TTTGTCCGTA CCCGCACCTA TTACCCGCAG 
TTAGGATTGA TCCAGTTATT TGACGGGGCA AATGTCGCCC TGATCGATCC GCTCGGCATC 
AGCGACTGGT CGCCGTTAAA AGCGGTGTTG CGCGATACGG GAATCACCAA ATTTCTGCAC 
GCGGGTAGCG AAGATCTGGA AGTATTTCTG AATGCGTTTG GCGAACTGCC GGAACCCCTG 
ATTGATACGC AAATCCTGGC GGCGTTTTGC GGGCGCCCGC TGTCGTGGGG GTTTGCGGCG 
ATGGTAGAAG AGTATACGGG CGTGGCGCTG GATAAAAGCG AGTCTCGTAC CGACTGGCTA 
GCCCGGCCTT TAAGCGAACG TCAGTGTGAA TACGCGGCGG CGGATGTCTG GTATCTGTTA 
CCGATCGCCA AAAAGCTGAT GATTGAAACT GAAGCCGCAG GATGGCTGCC TGCCGCGCTT 
GATGAATGCC GATTGATGCA GCAGCGTCGT CAGGAGATTC AGGCGCCGGA AGAGGCATGG 
CGGGATATCA CTAATGCCTG GCAACTGCGT ACCCGCCAGT TAGCCTGTCT GCAACTTTTA 
GCTGACTGGC GGCTGCGTAA GGCGCGTGAG CGCGATATGG CGGTGAACTT TGTTGTGCGT 
GAAGAAAACC TGTGGGCGGT CGCGCGTTAT ATGCCGGGCA GTCTCGGTGA GCTGGATAGC 
CTGGGGCTTT CCGGCAGCGA GATTCGTTTT CACGGCAAGA CGTTGATATC GCTGGTGGCG 
AAAGCACAGG CGTTACCGGA AGAGGCATTG CCGGAGCCCC TGTTGAATCT GATGGACATG 
CCGGGCTATC GCAAAGCGTT TAAGGCCATC AAAGCGCTGG TGGCGGAGGT GAGCGCGTCG 
CATCACGTCA GCGGCGAGCT ACTGGCATCG CGTCGGCAGA TTAATCAGTT GCTTAACTGG 
CACTGGAAAT TAAAACCGCA AAATGGGCAA CCGGAATTGA TTTCCGGCTG GCGCGCCGAA 
CTGATGGCGG AGAAGTTAAC TCTTCTGTTG CAGGAGTATC CGCGTTAA
 
Protein sequence
MNYQMIETDD ALASLCEAVR ACPAIALDTE FVRTRTYYPQ LGLIQLFDGA NVALIDPLGI 
SDWSPLKAVL RDTGITKFLH AGSEDLEVFL NAFGELPEPL IDTQILAAFC GRPLSWGFAA 
MVEEYTGVAL DKSESRTDWL ARPLSERQCE YAAADVWYLL PIAKKLMIET EAAGWLPAAL 
DECRLMQQRR QEIQAPEEAW RDITNAWQLR TRQLACLQLL ADWRLRKARE RDMAVNFVVR 
EENLWAVARY MPGSLGELDS LGLSGSEIRF HGKTLISLVA KAQALPEEAL PEPLLNLMDM 
PGYRKAFKAI KALVAEVSAS HHVSGELLAS RRQINQLLNW HWKLKPQNGQ PELISGWRAE 
LMAEKLTLLL QEYPR