Gene SeSA_A0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0115 
Symbol 
ID6518698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp121582 
End bp122427 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content54% 
IMG OID642745289 
ProductDNA-binding transcriptional regulator AraC 
Protein accessionYP_002113121 
Protein GI194736475 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.839696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0929131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA CGCAAAATGA TCCGCTATTG CCGGGATATT CATTTAATGC CCATCTGGTC 
GCCGGGCTGA CGCCGATTGA AGCGAATGGA TATCTGGATT TTTTTATCGA TCGTCCGTTG 
GGCATGAAGG GATATATTCT TAACCTGACC ATCCGCGGAG AGGGCGTCAT TAATAATAAT 
GGCGAGCAGT TTGTCTGTCG GCCTGGCGAT ATATTATTGT TTCCGCCGGG CGAGATTCAT 
CACTATGGAC GGCATCCGGA CGCCAGCGAG TGGTATCACC AGTGGGTTTA TTTCCGGCCT 
CGCGCCTACT GGCAGGAGTG GCTGACCTGG CCGACAATCT TTGCCCAGAC AGGATTTTTC 
CGCCCGGACG AGGCGCGCCA GCCGCATTTC AGCGAACTGT TCGGGCAGAT CATCAGCGCC 
GGGCAAGGGG AAGGTCGCTA TTCTGAGCTA CTGGCGATCA ATCTGCTGGA GCAGTTGTTG 
CTCAGACGTA TGGCGGTAAT TAATGAGTCG TTGCATCCGC CGATGGATAG CCGTGTGCGC 
GATGCCTGCC AGTATATCAG CGACCATCTG GCGGACAGCC ATTTTGATAT CGCCAGCGTC 
GCCCAGCATG TCTGCCTGTC GCCCTCCCGG TTATCGCATC TGTTCCGCCA GCAGTTAGGC 
ATTAGCGTAT TGAGTTGGCG CGAAGATCAG CGTATCAGCC AGGCGAAACT CCTGCTTAGC 
ACCACGCGAA TGCCGATAGC GACCGTTGGG CGCAATGTTG GATTTGACGA TCAGCTCTAT 
TTTTCGCGGG TATTTAAAAA ATGCACCGGG GCAAGTCCTA GCGAGTTCAG GGCCGGATGT 
GAATAA
 
Protein sequence
MAETQNDPLL PGYSFNAHLV AGLTPIEANG YLDFFIDRPL GMKGYILNLT IRGEGVINNN 
GEQFVCRPGD ILLFPPGEIH HYGRHPDASE WYHQWVYFRP RAYWQEWLTW PTIFAQTGFF 
RPDEARQPHF SELFGQIISA GQGEGRYSEL LAINLLEQLL LRRMAVINES LHPPMDSRVR 
DACQYISDHL ADSHFDIASV AQHVCLSPSR LSHLFRQQLG ISVLSWREDQ RISQAKLLLS 
TTRMPIATVG RNVGFDDQLY FSRVFKKCTG ASPSEFRAGC E