Gene SeD_A4580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A4580 
Symbol 
ID6874834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp4418872 
End bp4420269 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content55% 
IMG OID642787487 
Productsensor protein ZraS 
Protein accessionYP_002218089 
Protein GI198245723 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.910728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTTTA TACGATTACA TAAAGATGCC GCTGCAACGT GGTTGAGTCG GCTGTTACCT 
GCGGCGATCT TCATTCTGGT GGGGCTATTT TCCATTATGG TCATTCGCGA CTATGGCCGT
GAGAGCGCTG CCGCCAGGCA GACGCTGCTG GAAAAGGGAA ATGTACTCAT TCGCGCTCTG
GAGTCCGGCA CGCGAGTAGG TATGGGAATG CGGATGCATC ACGCGCAGCA GCAGACATTG
CTGGAAGAGA TGGCGGGTCA GCCAGGCGTG TTGTGGTTCG CTGTAACGGA TGCGCAGGGG
GTAATCATCA CTCATAGCAA CCCTGGCATG GTGGGCAAAT CGCTCTATTC CCCATCTGAA
ATGCATCAAC TAAACCCCGG GCCGCAGGAG CGTTGGCGGC GTGTCGACGT TGCTGCTAAC
GGCGAGACGG TGCCTGCGCT GGAAATTTAC CGTCAGTTCC AGCCGCTTTT CGGTATGAGA
GGTCACGGTA TGAGGGGGCA CGGCATGGCG CGTAGCGCCA ATGACGACGA ACCAGCGAAA
CAAACTATTT TTATTGCCTT TGACGCCAGC GAGCTGGCCG CGACACAGGC AAGGGAGTGG
CGTAATACGC TGATTGTTTT GTCTGCGTTA GCGGCGGTGT TGTTGGCAAC GTTACTGGCA
TTTTTTTGGC ATCAGCGTTA TCAGCGCTCG CACAGAGAAC TGCTTGATGC AATGAAGCGT
AAAGAAAAGC TGGTGGCGAT GGGGCATCTG GCGGCGGGCG TCGCGCACGA AATTCGTAAC
CCGCTCTCGT CCATCAAAGG GCTGGCGAAA TACTTTGCCG AGCGCACGCC TGCCGGCGGC
GAGTCGCATG AACTGGCGCA GGTGATGGCC AAAGAGGCCG ACCGTTTGAA CCGGGTGGTA
AGCGAATTGC TCGAACTGGT AAAGCCCGCG CATCTGACGC TCCAGACGGT TAACCTCAAT
GATATTATTA CTCACTCCCT GAATCTGGTC AGTCAGGATG CCCAAAGCAG AGAGATTCAG
TTGAGATTCA CGGCGAATGA GACGCTTAAG CGTATTCAGG CTGACCCGGA CAGGCTGACT
CAGGTGCTGT TGAATTTGTA CCTGAACGCT ATTCATGCGA TTGGCCGCCA GGGAACGATT
AGCGTAGAGG CAAAAGAAAG TGGGACCGAC CGCGTTATCA TCACTGTTAC CGATAACGGG
AAAGGGATCG CCCCGGATCA GCTGGAGGCG ATTTTTACGC CTTATTTTAC GACCAAAGCT
GACGGGACAG GCCTGGGGCT GGCGGTGGTG CAAAATATCA TCGAACAGCA TGGCGGCGCG
ATTAAGGTGA AAAGTATTGA GGGTAAAGGC GCGGTCTTTA CTATCTGGTT GCCAGTGATA
GCGAGACAAC AGGATTAA
 
Protein sequence
MSFIRLHKDA AATWLSRLLP AAIFILVGLF SIMVIRDYGR ESAAARQTLL EKGNVLIRAL 
ESGTRVGMGM RMHHAQQQTL LEEMAGQPGV LWFAVTDAQG VIITHSNPGM VGKSLYSPSE
MHQLNPGPQE RWRRVDVAAN GETVPALEIY RQFQPLFGMR GHGMRGHGMA RSANDDEPAK
QTIFIAFDAS ELAATQAREW RNTLIVLSAL AAVLLATLLA FFWHQRYQRS HRELLDAMKR
KEKLVAMGHL AAGVAHEIRN PLSSIKGLAK YFAERTPAGG ESHELAQVMA KEADRLNRVV
SELLELVKPA HLTLQTVNLN DIITHSLNLV SQDAQSREIQ LRFTANETLK RIQADPDRLT
QVLLNLYLNA IHAIGRQGTI SVEAKESGTD RVIITVTDNG KGIAPDQLEA IFTPYFTTKA
DGTGLGLAVV QNIIEQHGGA IKVKSIEGKG AVFTIWLPVI ARQQD