Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3804 |
Symbol | rplB |
ID | 6874733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3634602 |
End bp | 3635423 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642786771 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_002217399 |
Protein GI | 198245024 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00899018 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTTG TTAAATGTAA ACCGACATCT CCGGGTCGTC GCCACGTCGT TAAAGTGGTC AACCCAGAGC TGCACAAGGG CAAACCTTTT GCTCCGCTGG TTGAAAAAAA CAGCAAATCC GGTGGTCGTA ACAACAATGG CCGTATCACC ACTCGTCATA TCGGTGGTGG TCACAAACAG GCTTATCGTA TTGTTGACTT CAAACGCAAC AAAGACGGTA TCCCGGCAGT TGTTGAACGT CTTGAGTACG ATCCGAACCG TTCCGCGAAC ATCGCGCTGG TTCTGTACAA AGACGGCGAA CGCCGTTACA TCCTGGCCCC GAAAGGCCTG AAAGCTGGCG ACCAGATTCA GTCTGGCGTT GATGCTGCAA TCAAAGCAGG CAACACCCTG CCGATGCGCA ATATCCCGGT TGGTTCTACC GTTCATAACG TAGAAATGAA ACCAGGTAAA GGCGGTCAGC TGGCACGTTC CGCTGGTACT TACGTTCAGA TCGTTGCTCG CGATGGCGCT TATGTCACCC TGCGTCTGCG TTCTGGTGAA ATGCGTAAAG TCGAAGCAGA CTGCCGTGCA ACCCTGGGCG AAGTTGGCAA TGCTGAGCAT ATGCTGCGCG TTCTGGGTAA AGCAGGTGCT GCACGCTGGC GTGGCGTTCG TCCTACCGTT CGCGGTACTG CGATGAACCC AGTAGACCAC CCACATGGTG GTGGTGAAGG TCGTAACTTT GGTAAGCACC CGGTAACTCC GTGGGGCGTT CAGACCAAAG GTAAGAAGAC CCGCAGCAAC AAGCGTACTG ATAAATTCAT CGTACGTCGC CGTAGCAAAT AA
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Protein sequence | MAVVKCKPTS PGRRHVVKVV NPELHKGKPF APLVEKNSKS GGRNNNGRIT TRHIGGGHKQ AYRIVDFKRN KDGIPAVVER LEYDPNRSAN IALVLYKDGE RRYILAPKGL KAGDQIQSGV DAAIKAGNTL PMRNIPVGST VHNVEMKPGK GGQLARSAGT YVQIVARDGA YVTLRLRSGE MRKVEADCRA TLGEVGNAEH MLRVLGKAGA ARWRGVRPTV RGTAMNPVDH PHGGGEGRNF GKHPVTPWGV QTKGKKTRSN KRTDKFIVRR RSK
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