Gene SeD_A3379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3379 
Symbol 
ID6872546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3250776 
End bp3251489 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content51% 
IMG OID642786382 
Productthiol:disulfide interchange protein DsbC 
Protein accessionYP_002217020 
Protein GI198242869 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC GTTTTATGAT GTTCACTTTA CTGGCGGCGG CGTTTTCAGG CGTGGCCCAT 
GCGGATGATG CGGCTATCCG TCAGTCGCTG GCTAAGTTGG GCGTTCAGAG TACGGAAATT
CAGGCCTCGC CAGTGGCAGG GATGAAAACC GTCCTCACTC ACAGCGGCGT ACTGTACGTC
ACTGATGACG GCAAACATAT TATTCAAGGG CCGATGTATG ACGTGAGCGG CGCGCATCCG
GTAAACGTGA CGAACAAACT GCTGATGAGC CAGCTAAATG CGCTGGAAAA AGAGATGATC
GTCTATAAAG CGCCGGATGA GAAACATGTC ATTACTGTTT TTACCGATAT CACCTGCGGC
TATTGTCATA AGCTACATGA AGAGATGAAA GATTATAACG CGCTGGGGAT CACGGTACGT
TATCTGGCCT TCCCGCGCCA GGGGCTGGAA AGCCAGGCGG AGCAGGATAT GAAATCTATC
TGGTGCGCCA AAGACAAAAA CAAAGCGTTT GATGACGCCA TGGCAGGTAA GGGCGTGAAA
CCGGCAAGCT GTGACGTGAA CATTGCTGAT CATTATGCGT TGGGCGTGCA GTTGGGCGTT
AGCGGTACGC CAGCCATTGT ATTGAGTAAC GGCTATGTGG TGCCTGGCTA TCAGGGACCG
AAAGAGATGA AAGCGTTTCT TGATGAGCAT CAAAAACAGA CCAGTGGTAA ATAA
 
Protein sequence
MKKRFMMFTL LAAAFSGVAH ADDAAIRQSL AKLGVQSTEI QASPVAGMKT VLTHSGVLYV 
TDDGKHIIQG PMYDVSGAHP VNVTNKLLMS QLNALEKEMI VYKAPDEKHV ITVFTDITCG
YCHKLHEEMK DYNALGITVR YLAFPRQGLE SQAEQDMKSI WCAKDKNKAF DDAMAGKGVK
PASCDVNIAD HYALGVQLGV SGTPAIVLSN GYVVPGYQGP KEMKAFLDEH QKQTSGK