Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2926 |
Symbol | rpmA |
ID | 4019451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3493721 |
End bp | 3493975 |
Gene Length | 255 bp |
Protein Length | 84 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637956977 |
Product | 50S ribosomal protein L27 |
Protein accession | YP_563927 |
Protein GI | 91794276 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0211] Ribosomal protein L27 |
TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000309766 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACATA AAAAAGCTGG CGGTAGTACT CGTAACGGCC GCGATTCAGA AAGTAAACGT CTTGGTGTTA AGCGCTTTGG CGGTGAATCA GTTCTAGCAG GTAACATTAT CGTTCGTCAA CGTGGTACTA AGTTCCACGC TGGTGTAAAC GTAGGTATTG GTCGTGACCA TACTTTGTTT GCATTATCAG ACGGTAAAGT AAAGTTTGAA GTTAAAGGTC CTAATAACCG TAAGTTTATT AGCATCGAAG CTTAA
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Protein sequence | MAHKKAGGST RNGRDSESKR LGVKRFGGES VLAGNIIVRQ RGTKFHAGVN VGIGRDHTLF ALSDGKVKFE VKGPNNRKFI SIEA
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