| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2690 |
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| Symbol | |
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| ID | 4019207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3221187 |
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| End bp | 3222140 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637956734 |
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| Product | porin |
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| Protein accession | YP_563692 |
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| Protein GI | 91794041 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000491313 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAACG TTTTTAGCAA ATCTTTACTC GCTGCTGCGA TTGCAACTGC AACCCTGTCA
ACTGCTCACG CAGGTGAACC GCTTCAAGTG TACGGTAAGT TAAACGTCAC AGCTCAATCA
AATGATGTAA AAGGTGACAC TAAAACCACT ATCCAGAGCA ATGCATCTCG ATTTGGCGTA
AAGGGTGATC TTGCGTTAAA TAATTCTCTA GAAGCTTTTT ATACCATCGA ATATGAAGTC
GATACTGGTG ATGACGTTAA AGAAAACTTC AAGGCGCGTA ACCAATTTGT GGGTTTAAAA
GGCAACTTCG GTGCCGTTTC TGTGGGTCGT AATGACACTA TGTTAAAAGT GTCTCAAGGC
AAAGTGGATC AGTTCAACGA TTTAGAAGCC GATGCTAAAA ACCTGTTTAA AGGTGAAAAT
CGCATGGCAC AAACGGCCAC CTATTACACC CCTTCAGTGG GGGATTTCAA ATTTGGTGTG
ACTTATGTTG CCGATGGTGA CAGCGACCAA GCCTATCTGG ATCTAAACAA AATAGAACAA
ACCCGTGACG GCTTCAGCTT AGCGGCCATG TACGGTGATG ATGAGCTGAA AACCACTAAC
TTCTACGCGG CGCTCGCCTA TGATTCGGAA GTTAAAGGTT ATGATATTCT GCGTGCAACC
GTGCAAGCAA AATTAGCAGA TCTCGTTGTT GGTGGCATGT TCCAGCAGGA AGAGAAAGTT
GATGGTGGCG ATAGTAAAAA CGGTTACCTG TTAAGTGCCG CTTATGAAAT ATCAGCAGTA
ACCTTAAAAG CCCAGTTCCA AGATATGGAA GACATGGGCG ATTCTTGGTC TGTGGGCGGC
GACTACAAGT TAGCTAAACC AACTAAGTTA CTGGCGTTCT ACTCCAATCG TTCGTTAGAA
AAAGCAACCA GCGATGACAA CTACTTCGGC ATAGGCATTG AACATAAGTT CTAA
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| Protein sequence | MMNVFSKSLL AAAIATATLS TAHAGEPLQV YGKLNVTAQS NDVKGDTKTT IQSNASRFGV
KGDLALNNSL EAFYTIEYEV DTGDDVKENF KARNQFVGLK GNFGAVSVGR NDTMLKVSQG
KVDQFNDLEA DAKNLFKGEN RMAQTATYYT PSVGDFKFGV TYVADGDSDQ AYLDLNKIEQ
TRDGFSLAAM YGDDELKTTN FYAALAYDSE VKGYDILRAT VQAKLADLVV GGMFQQEEKV
DGGDSKNGYL LSAAYEISAV TLKAQFQDME DMGDSWSVGG DYKLAKPTKL LAFYSNRSLE
KATSDDNYFG IGIEHKF
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