Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1402 |
Symbol | yajC |
ID | 4017339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1635013 |
End bp | 1635288 |
Gene Length | 276 bp |
Protein Length | 91 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637955410 |
Product | preprotein translocase subunit YajC |
Protein accession | YP_562411 |
Protein GI | 91792760 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1862] Preprotein translocase subunit YajC |
TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000229037 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATGA TTTTCATGCT GGCAATTTTC GGTTTGATTT TCTATTTCAT GATTTTTCGT CCTCAGTCCA AGCGCGTTAA AGAGCATAAA AACCTAATGT CTTCACTAGG CAAAGGCGAT GAAGTGCTAA CAAGCGGCGG CATATTAGGT AAGATTGCTA AAATCAACGA TGACAGTGAT TACGTGTTAC TGAGCATCAA TGAAACCGCG CAAATCACTA TTAAGAAGGA CTATATCACT GCTGTATTGC CTAAAGGCTC TATTCAGTCG TTGTAA
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Protein sequence | MEMIFMLAIF GLIFYFMIFR PQSKRVKEHK NLMSSLGKGD EVLTSGGILG KIAKINDDSD YVLLSINETA QITIKKDYIT AVLPKGSIQS L
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