| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1218 |
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| Symbol | |
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| ID | 4017484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1419812 |
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| End bp | 1422736 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955214 |
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| Product | peptidase M16-like protein |
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| Protein accession | YP_562227 |
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| Protein GI | 91792576 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATA GATGGATGTT AGCTTGTACC ATCAGTGCTA TTTTGGCCGC TTGTAGCCAA
ACTAAAGATC AAACTGGACT CAGCTCAGGT GCACAGCAAA ACAGCGCCAC AAATTATACC
AGTAGCATTA CCCTGTTAGA GCAACATTTA CCAGATGCGG GGGAGGTGGG AATCGCTTAT
AAAAAGTATC AGCTTGATAA TGGCCTTACC GTCATTTTGC ACCAAGATAA GTCAGATCCC
TTAGTGCATG TCGATGTGAC CTACCATGTG GGCTCGGCCC GAGAACTCGC TGGCCGTAGT
GGTTTTGCTC ATCTGTTTGA ACACATGATG TTTCAAGGCT CACAACATGT TGCCGATGAA
CAGCATTTTA AGCTCATTAC CGAGGCGGGG GGGACCTTAA ATGGCACCAC CAATACAGAC
AGAACCAACT ACTTTGAAAC GGTTCCCAGT AATCAACTGG AAAAAATGCT CTGGTTAGAA
GCCGACAGAA TGGGATTTTT ACTGCCAGCG CTGACGGATG AAAAATTCGA GTTGCAGCGC
GAAACCGTGA AGAATGAGCG GGCACAGCGC ATTGACAATA AGCCCTATGG CCGCTTGAAC
GAGCGCTTTA ATCAGGCGCT TTATCCCGTC GGGCACCCGT ATTCTTGGCC TGTTATCGGT
TGGCCAGATG ATTTAAACCG TGCCACTACA GAAGATGTTA AGCAATTCTT TAAACGCTGG
TATGGCCCCA ATAACGCCAC CTTAACCATA GGCGGGGATT TTGATGAGCA GCAAGCCTTA
GCTTGGGTTG ATAAATACTT TGCCGACATT CCTAAAGGCC CCGAGGTGAA ACCTCAAGCA
AAAACCTTAG TGACCTTAGA TAAGACTCGC TATCTTTCGA TGGAAGATAA GGTGCATTTG
CCGCTAATTT ATATCGCATT CCCAACGGTT TATGCCGGCC ACCCCGACGA AGCCCCCTTG
GATTTGTTGG CCAATATTTT AGGCGGCGGT AAGACATCAC TATTTTATAA AAATTTAGTT
AAACAAGGTC ATGCGGTGCA GGCCAGTGTG AATCATCCTT GTCAGGAGCT GGCATGTCAG
TTGTCTTTAT ATGCCTTAGC TAACCCGAGT CGGGGTGGCA AGCTCAGTGA ACTGGAACAG
ATGATTACTC AATCCATAGC CGAGTTTGAG CAGCGCGGGG TCACGGATGA AGATTTACAA
AAGGTGAAAG TGCAGTTTAA AGCCAGCACC ATATTCACCA TGCAAAGTGT GGCCGGCAAA
GTGGCAACCC TTGCCAGCAA TCAAACCTTT TTTGGCAAGC CGGATTTATT GGCAGATGAC
TTGGCTCGCT ATCAGCAAGT GACCAAGGCC GATGTGATGC GAGTGTTTGC GCGTTACATC
AAAGATAAAC CGATGACAGT GATGAGTGTT GTTCCAGAAG GGGCTAGGGC ATTAATTGCA
AAGGCGGATA ATTTCACCCC CGCACAGGCG GCACCGGCCA AAACGGCGGT TACTTTACCC
GCCACCTTAG CCAATACTGT ATCTGCAGAG CCTGGCTTAA GCAATCACAA TGAGTTAACT
AAAAACACAG CGCCGCGGCA TTTCGATAGG GCCTTGGTGC CTGAAGCTGG CATGGCGCCT
GTGATGACAG TGCCACGTCT GTGGCGCCAA ACCCTTGCTA ATGGCATTGA GGTGATGGGC
ACTCAGAGCC TTGAAACCCC AACAGCTGAA TTGCTTATCT ATCTGGAAGG GGGGCATTCG
TTAGTGCCGG TTGAAAAGGC TGGGCTTGCT GGACTCACAG CGGCCATGCT CAATGAATCT
AGCACATTAC GTAGCACTGA AGCCTTGGCG CAAGCATTGG AGTTATTAGG CAGCAGCATC
AGCTTTGGAT CATCAGACAG CCAAAGCTAT ATCAAGGTAT CAAGCTTAAC TGAAAATCTT
AAAGCGACCC TTGAAATAGT GGAGGAAAAA CTGTTTTCCC CAGCCTTAAA TAGCGAAGAT
TTTGAGCGTC TCAAAGAACA GCAATTACAA AGTTTGCAGC ATTTAAGCTC AGATCCAAGC
TATCTGGCAA GCCAAGGCTT TGCCAAACTC TTGTATGGCG AAAATAGCAG TTTAGGCGTT
AGCAATACAG GCACCTTAGA AAGCATCAAG GCCTTGACGC TCTTGGACGT GAAGCACTTT
TATCAGACGC AGTATTCAGC CTCTGTGGTG AAAATGGTGT TGGTGGCGGA CCTCAATAAA
GCGAGTATTA TCCCCATGCT GAAAGGATTT AGTCAGTGGC AAGCGACCCC TGTGAGCCAG
CCTAAGATGG CGTCGTTTCC AACCCTTGCT AGCGGGAAAA TCCACATTAT CCATAAGCCG
GGCTCAGCCC AATCTGTGAT TTATATTGGC AAGCGGGCGC TTCCTTATGA TGCCACTGGT
GATTACTTTA AAGCCTATTT GATGAACTAT CCTCTGGGCG GCGCCTTTAA CAGCCGGATT
AATTTGAATT TGCGCGAAGA TAAAGGGTAT ACCTATGGGG CGCGCAGTCA GTTTTCAGGG
GATAATAAAA CCGGACAGTT TTTGGTGACT GCCAGTGTGC GAGCTGATGT GACTGGGCTG
GCATTAATTG AATTTATTAA GGAAATCAAG GCTTATCAAA CTGAGGGCAT GACAGCCGCT
GAGCATGACT TTATGCGCAG CTCCATCGCC CAAAGCCAAG CCTTAGATTA TGAAACACCA
TATCAGAAGG CGGGGTTTGT GCGTATGATC CAGCGTTATG ATTTAGCAGA AGATTTTACT
TCAAAGCAAG ATGAAATCAT TAAAACTGTG AGCCTAAGTG AACTCAATGC ACTGGCGCAA
TCCTTACTGG ATTTAGACAC TATGACTATC TTGATTGTGG GTGACAAAAA CCAACTGACG
GAGCAGCTTA AGGATTTAGG CTATCCTATT CAACTGATGA ATTGA
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| Protein sequence | MNNRWMLACT ISAILAACSQ TKDQTGLSSG AQQNSATNYT SSITLLEQHL PDAGEVGIAY
KKYQLDNGLT VILHQDKSDP LVHVDVTYHV GSARELAGRS GFAHLFEHMM FQGSQHVADE
QHFKLITEAG GTLNGTTNTD RTNYFETVPS NQLEKMLWLE ADRMGFLLPA LTDEKFELQR
ETVKNERAQR IDNKPYGRLN ERFNQALYPV GHPYSWPVIG WPDDLNRATT EDVKQFFKRW
YGPNNATLTI GGDFDEQQAL AWVDKYFADI PKGPEVKPQA KTLVTLDKTR YLSMEDKVHL
PLIYIAFPTV YAGHPDEAPL DLLANILGGG KTSLFYKNLV KQGHAVQASV NHPCQELACQ
LSLYALANPS RGGKLSELEQ MITQSIAEFE QRGVTDEDLQ KVKVQFKAST IFTMQSVAGK
VATLASNQTF FGKPDLLADD LARYQQVTKA DVMRVFARYI KDKPMTVMSV VPEGARALIA
KADNFTPAQA APAKTAVTLP ATLANTVSAE PGLSNHNELT KNTAPRHFDR ALVPEAGMAP
VMTVPRLWRQ TLANGIEVMG TQSLETPTAE LLIYLEGGHS LVPVEKAGLA GLTAAMLNES
STLRSTEALA QALELLGSSI SFGSSDSQSY IKVSSLTENL KATLEIVEEK LFSPALNSED
FERLKEQQLQ SLQHLSSDPS YLASQGFAKL LYGENSSLGV SNTGTLESIK ALTLLDVKHF
YQTQYSASVV KMVLVADLNK ASIIPMLKGF SQWQATPVSQ PKMASFPTLA SGKIHIIHKP
GSAQSVIYIG KRALPYDATG DYFKAYLMNY PLGGAFNSRI NLNLREDKGY TYGARSQFSG
DNKTGQFLVT ASVRADVTGL ALIEFIKEIK AYQTEGMTAA EHDFMRSSIA QSQALDYETP
YQKAGFVRMI QRYDLAEDFT SKQDEIIKTV SLSELNALAQ SLLDLDTMTI LIVGDKNQLT
EQLKDLGYPI QLMN
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