| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1207 |
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| Symbol | |
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| ID | 4017730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1403468 |
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| End bp | 1406056 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955197 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_562216 |
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| Protein GI | 91792565 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGTA TCGATTCTTC TGAGTTAGAA AAGCACACCC CCATGATGCG TCAGTATTTG
ACCATGAAAG CCGCCCATCC TGAGATGCTG CTATTTTATC GCATGGGAGA TTTTTACGAA
CTTTTCTATG AAGATGCCAA ACTTGCCTCA GAACTGCTAG GCATATCTTT AACTGCTCGC
GGTAAAAGTG GCGGCGATCC TATCCCAATG GCGGGCTTGC CTTATCATGC AGTTGAAGGC
TATTTAGCCA AACTGGTTCA AATTGGTCAG TCCGTGGCGA TTTGTGAGCA AGTGGGCGAT
CCTGCTACCT CGAAAGGGCC AGTAGAGCGC AAAGTGGTGC GCATTGTCAC TCCAGGCACC
TTAACCGATG AAGCCTTACT GCAAGAGCAT CAAGACAACC TATTAGCTGC CATATATCAA
GGCAAGGTAG GCTTTGGTTA CGCGACGCTC GATATTTCAT CGGGACGTTT TGTGATTGCA
GAGTTAGACA CTCAAGAGGC CCTAGAAGCT GAATTGCAGC GCACCCGCCC TGTGGAACTG
CTCTACAGTG AAGACTTTAG CAACCTAAGC TTAATCAATC ATTTAAAAGG CATACGTCGC
CGCCCTGAAT GGGAATTTGA TTTTGATACC AGTGTGAACT TGTTGCTGCA ACAATTTGGC
ACCAAAGATT TGCATGGTTT TGGTATTAGT GATGCGCGCC TTTCCTTACA GGCCGCGGGC
TGCTTAATGC AGTACGTGAA AGACACCCAG AAGACAGCCC TGCCCCACAT AAATGCCATA
GTGCGCTTCA ATCAGGCGGA TTCGATCATT TTAGATGCGG CTACCAGACG TAATTTAGAG
CTAACCCAGA ATTTATCAGG CGGCCGCGAG CACACCTTAG CCTGGGTATT GGACAACACC
GCCACCCCCA TGGGAAGCCG TATGCTGCAG CGCTGGTTAC ACCAGCCACT AAGAGACAAC
AACATAATAG CCAGCCGCCA CAATGCGGTG GCTGAACTCA TCGAAGCCAA TTTATTTGAC
GAATTGCATC AGCAGCTAAA ATCATTAGGT GATATCGAAC GCATCATGGC TCGCCTCGCG
CTTCGAAGTG CACGGCCACG GGATTTCGCT CGCCTTCGCC AAGCGTTAAG TCTCTTGCCT
GAATTGCAAC ACACCTTAGG CCAATGCAAA ACCCCACTGC TTACTAAGTT AGCCCAGTTG
ATTGGCGAGT TTCCTGCCGA GCATGAGTTA CTTGAGAATG CCATAGTCGA TAGCCCGCCT
ATGCTTATTC GCGATGGCGG GGTTATTCGC AGCGGTTATC ACAGCGAACT TGATGAGTGG
CGCGCCTTAA GTGAAGGCGC CAGTGATTAC TTAACTGAGC TTGAAGCCAG AGAAAAACAA
GCCACGGGGA TCAGCACCTT AAAAGTTGGC TATAACCGCG TCCATGGTTA CTACATAGAA
GTCAGCCGCC TTCAAGCCGA TAAAGTGCCC TTAAGCTATC AGCGCCGTCA AACCTTAAAA
GGCACTGAGC GCTACATAAC CCCTGAGCTT AAAGTGTATG AAGAAAAAGT CCTCTCAAGC
CAAGGTAAGG CTCTAGCGTT AGAGAAACAG CTGTGGGATC AATTGTTTGA TTTAATTTTG
CCTAAGCTTA ATGAGCTTAG GGACTTTGCC AATGCTGCCG CCGAGCTTGA TGTCATTTGC
TGTTTTGCCG AGCGCGCCGA AAGCCTGCAT TACACTCAGC CGCAAATGGT CTCAAAAACC
GGCATTCAAA TTAATGCTGG CCGCCATCCC GTAGTTGAGC GCGTTAGCAG CACAGCCTTT
ATTGCCAACC CCGTCAACTT AGATGCAAAG CGTCACATGC TTATCGTCAC CGGCCCGAAC
ATGGGCGGTA AATCTACCTA TATGCGCCAA GTGGCCTTGA TAAGTTTGAT GGCCCACATT
GGCTGTTTTG TTCCTGCTGA CAGCGCCGTC ATTGGTCCTA TCGACAGAAT TTTCACCCGC
ATTGGCGCCT CTGATGACTT GGCCTCTGGC CGCTCAACCT TTATGGTCGA AATGACAGAA
ACTGCCAACA TTCTCCATAA TGCCACCAGT CAAAGTTTGG TATTAATGGA TGAGATAGGC
CGGGGCACCT CAACCTATGA TGGTTTGTCC CTCGCTTGGT CAGCGGCTGA GTATTTAGCA
TTGCAAATCA AAGCCATGAC GCTATTTGCG ACCCATTATT TTGAACTAAC ACAATTACCA
GATTTGATCC CCGGCGCCAA CAATGTGCAT CTAGATGCCA TAGAGCACGA TGACACCATC
GCCTTTATGC ATGCAGTGCA AGAAGGCGCT GCCAGTAAGA GTTATGGCCT GCAAGTCGCC
GCATTAGCTG GGGTGCCAAG CCATGTTATT CAAGCCGCTA AACATAAACT GCATCAGCTA
GAGAGCCGTG ATAATCAGGC ATCACCCGCT GTCGCCAGCG CACCGCAACA ACAGAGTCTG
AGTCTAAGCC CTGCCCCTAT GATGGGTGAA AAAGCTCTGA ATAAGCTAAC CACGATTAAT
CCCGATGAAC TCAGCCCAAA ACAAGCCTTA GACTTGCTCT ACGAGCTGAA AAAACTCGCT
AAAAGCTGA
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| Protein sequence | MTSIDSSELE KHTPMMRQYL TMKAAHPEML LFYRMGDFYE LFYEDAKLAS ELLGISLTAR
GKSGGDPIPM AGLPYHAVEG YLAKLVQIGQ SVAICEQVGD PATSKGPVER KVVRIVTPGT
LTDEALLQEH QDNLLAAIYQ GKVGFGYATL DISSGRFVIA ELDTQEALEA ELQRTRPVEL
LYSEDFSNLS LINHLKGIRR RPEWEFDFDT SVNLLLQQFG TKDLHGFGIS DARLSLQAAG
CLMQYVKDTQ KTALPHINAI VRFNQADSII LDAATRRNLE LTQNLSGGRE HTLAWVLDNT
ATPMGSRMLQ RWLHQPLRDN NIIASRHNAV AELIEANLFD ELHQQLKSLG DIERIMARLA
LRSARPRDFA RLRQALSLLP ELQHTLGQCK TPLLTKLAQL IGEFPAEHEL LENAIVDSPP
MLIRDGGVIR SGYHSELDEW RALSEGASDY LTELEAREKQ ATGISTLKVG YNRVHGYYIE
VSRLQADKVP LSYQRRQTLK GTERYITPEL KVYEEKVLSS QGKALALEKQ LWDQLFDLIL
PKLNELRDFA NAAAELDVIC CFAERAESLH YTQPQMVSKT GIQINAGRHP VVERVSSTAF
IANPVNLDAK RHMLIVTGPN MGGKSTYMRQ VALISLMAHI GCFVPADSAV IGPIDRIFTR
IGASDDLASG RSTFMVEMTE TANILHNATS QSLVLMDEIG RGTSTYDGLS LAWSAAEYLA
LQIKAMTLFA THYFELTQLP DLIPGANNVH LDAIEHDDTI AFMHAVQEGA ASKSYGLQVA
ALAGVPSHVI QAAKHKLHQL ESRDNQASPA VASAPQQQSL SLSPAPMMGE KALNKLTTIN
PDELSPKQAL DLLYELKKLA KS
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