| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0624 |
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| Symbol | |
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| ID | 4016999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 714139 |
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| End bp | 715566 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954609 |
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| Product | major facilitator transporter |
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| Protein accession | YP_561637 |
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| Protein GI | 91791986 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGA TTTTAGGAAA GCAAACAATG AATGCTAAGC GATGGCAGAT ACTGAGTGTT
ATCTCTATTA TGCAGCTGGT ACTACTGCTT GACGCTACTG TAGTGAATGT GGCTTTGCCG
CAAATCAAAC ATGATCTAGG CCTTACCGAT GGCTCTTTAA CTTGGGTCGT TAATGCCTAC
CTGATTGCCG CAGGGTCGCT GCTGCTGCTA GGTGGCCGCA TAGGTGATGC CTATGGCGTG
CTGCGTATAT TTAAATTTGG GGTAGCCATT TTTGCTATCT TCTCCGTGGT AGCAACGCTT
GCACCTAACG CTACACTACT CATAGTCGGG CGTGCAGGAC AAGGTGTAGG TGAAGCGCTC
GCAGCTGCAA ATGGTTTAGC CATGATATCC TTATTGTTCC CCTCTGGCCC CGAACGCGGC
AAAGCATTCG GGATTTGGGC AGGACTTGGT GGACTTGGAT CTATTTTGGG AGTTTTACTC
TCTGGAGTCC TCACAGAATA CCTGTCGTGG CGCTGGATCT TTGGTATTAA CATCCCGATT
ATCTTAGCCT TAGGCGTTGC TATTGTGCTT GTCATCCCAA CATTCCCTAA AAAGATATCC
ACACACTTAG ATCTTGGTAA TGCATGCATC CTAGTTTTTG CTATGGTCGC CATCGTTATG
GCTATTATAG GTACAGGCAT AGAGCAACTG ACTTTGCTGC GTATCACATT ATTACTACTG
GGTGCTTTGG GCATTACCTT GGTGCTTAAA CGTTGTAAAC AATCCGAAGA TGGCATAATA
CCCGCTCGGC TTATGACGCG TTCACCTAGG CTTGCTGGTT ATGGCATCAT TGCGATTCAA
GCCGCGACTT CCGGTGCGCT GTTCTATCTT GGTGTGTTAC TAATGCAAGA CTCCCTTGGC
ATGACACCGC TGCAAACAGG TCTAGCTTGG CTGCCATTCT GTTTAGGTTT TTTCCCTGGT
ATTTTCCTGT CCATAACCAT AGAGCAACGA AAAAGTGCCT TAGCTGCTGC CGTTATCGGC
CTGATAATTT CATCCTTAGG CTTTGTGCTG TTTGCACTTG GGGTGAATGC TAATAACTAT
TGGGTTGGCA TGATGCCTGC GATGCTGGTC ACTGCTATAG GTTTTGGCTG TGTCGCGCCG
GTTGCACAAT CGCTTGCGAC CAGCGATCTG TCTGAAGCTG ATGCGGGTTC AGGATCGGGG
ATCGCGACCA CAATACAGCA ATTACTTCAG GTCGGTGGCG TTACGATTCT AGTTTCCATC
GCTCTTGCAG TCAAAGACGA TACCAGTGTA GTGAATATTG ACTCAAACGG ATTTATGACT
GCGTTTTTAA TCGCCTCTTT TGTACTAATA ACTGGCGCCA TTGTTGTTGG TTTCAGCCGT
AATGCCTTAG CACCGACTAT CGGTGAACCC AGTGCAGAAA TTAGGTGA
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| Protein sequence | MTEILGKQTM NAKRWQILSV ISIMQLVLLL DATVVNVALP QIKHDLGLTD GSLTWVVNAY
LIAAGSLLLL GGRIGDAYGV LRIFKFGVAI FAIFSVVATL APNATLLIVG RAGQGVGEAL
AAANGLAMIS LLFPSGPERG KAFGIWAGLG GLGSILGVLL SGVLTEYLSW RWIFGINIPI
ILALGVAIVL VIPTFPKKIS THLDLGNACI LVFAMVAIVM AIIGTGIEQL TLLRITLLLL
GALGITLVLK RCKQSEDGII PARLMTRSPR LAGYGIIAIQ AATSGALFYL GVLLMQDSLG
MTPLQTGLAW LPFCLGFFPG IFLSITIEQR KSALAAAVIG LIISSLGFVL FALGVNANNY
WVGMMPAMLV TAIGFGCVAP VAQSLATSDL SEADAGSGSG IATTIQQLLQ VGGVTILVSI
ALAVKDDTSV VNIDSNGFMT AFLIASFVLI TGAIVVGFSR NALAPTIGEP SAEIR
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