| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0609 |
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| Symbol | |
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| ID | 4017023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 694523 |
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| End bp | 696655 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954594 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_561622 |
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| Protein GI | 91791971 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAACT CAAAAAATCG CTTCAGACTA ACCAGCGTCG CCATGGCCAT TACCATGAGT
TTTACCGCCA CAGTTGTGGC TGCAGAAGCG AAGAAAATAG AATCGACACC CGAAGTGATA
GTGGTTAGCG GTAGCGTATT GGGTAACTCA GAAGTTGCCG ACTTAAAAAC CTACACAGGT
AACCGCTCCA TCATCACCTC AGATCAAATA GAGCGCACCG GCGTACACTC CATAGATAGC
GCATTGCAAC AAGTACCCGG CCTTAAAATT AAAGATGAAA CCGGCACCGG CATTTTGCCG
AATATTTCGG TGCGAGGATT AGACAGTAGT CGCAGTGGTT ATGCTCAAGT GCTGTTGGAC
GGTATCCCCA TGACACTCGC CCCTTATGGG CACACGGGCC AATCTTTATT TCCTGCAACC
CTCTTTATGA TAGATAGGAT TGACGTGGCT CGCGGCGGCG CATCGGTGCA ATATGGCCCG
AATAATGTCG GCGGCGTGAT TAACCTGATT TCAAAGCCTA TCCCTGATGA TTGGGAAACC
CATTTGCATG AACGCATGAC CTTCTTTGGT GAAGGCCAAA CCCTGTTTGA TACCAATATC
AGCACAGGCG GCGCGGTGAA TGATGATTTC GCCCTGCGCT TAGATGGCAA TATCACTAAA
GGCGAGTCTT TTCGTGAGCA CTCAGACACA GACATCAAAA ATCTGCTGTT AAAAACCGTC
TGGAATATCG ATGAGCGCAA TAGCCTAGAT ACCAGTTTGC AATATTATGA TGCTTTCTCT
GAGTTGCCAG GCGCGCTGCA CACCGCAGCC TATGAAGCAG ACAGCCAACA ATCCCTGCGT
CCCAATGATG AGTTTAAGGC CGACACTAAA CGCCTATCGA TGAAATACAG CCATGTGCTC
GCGGGCTCAG ACACCATAGA CTACGGTGAG TTCGACTTAA CGGCCTTTGG CAATAAGAGC
TCACGTAATT TTCAATGGGA TTTTTACGAT AAAAACAAAG ACACCGACGG TAATTTAGGC
AGCAGCTGGA GCGACACCAC CCAAGAAGCC ACTCACTTGC GCAATTCCCC CCGTGACTTC
ACTGTGGTCG GCATAGAGCC CAAAATGAGC CTATTTATTG ATGGTGACGT GAGCCAACAT
ATTATCGCGG GAGCCCGTTA CGTTAACGAA GATATTACCT ATCAACTCAA CCACATAGAA
AAATCGACCC AAGCCGCAGT GCGCCCCCGT GACTGGCAGA TGGACACAGA TGCCATGGCC
TATTTTATCA GTAACAAAAT CGGCTTCTTG GATGACAGCT TGTCTGTTAC CCCAGGGCTG
AGATACGAAG ACGTACGCAT GACCTTTACC AACCTAGGTC AAGATTATAG CCAAGATAAC
CATGTTACTG AGCTGCTTCC CGGCATCACT TTAGGCTATG AGTTTACTGA CGCTTGGTTT
GCTTATGCCA ATGCTCAGCG CTCACTCAGA ACGCCGCAGA TCTCACAGCT TTGGCCTAAA
GGCCAGACCC TTGAGTCTGA ACTCTCGTGG AACTATGAAG CCGGCATTCG TTTTACTCCC
ACAGAGCGCA GCAATATTAA CCTAGCAGCG TACCGCATCG ACTTTAAAAA CAAAGCCGAA
TACGACAGAA ATATCAGCAT GTTCGTCAAT ATTGGGCAAA CCAAAAACCA AGGTATTGAG
TTAGAAGGCA CTTATTCCCC CCTGTCTTTA CCTGAGCTAA CCTTAAGCGG TGCGTATAAC
TATTTGGATA CCGAGCAGCT TGATGGAGAG TATGCGGGTA ATGAACTGCC TTCAGTCTCC
AAGCATCAGC TATCGGCCAG TGCGCTCTAC AGTATTGATG ATATAGATTT AGGCTTAATG
GCCTACTATT ACAGTCAATC CTTCGCCGAT TTAGCCAACA CTGTCACCGA AAGTGTCTCA
GGCACTGAAG GCGAAGTCCC CGCTTATACT GTGATTAACT TCAACATAAG TACCGAGTTT
TTTAAACAAG ACAATAAAGG CCTTAAGGTC GGTTTATCCG TTAACAACCT GTTTGATAAT
GACTATTACT TTAGAGGTTT AGATGTCTCT CCCGCTGGAC GAGTTGCAGC CCCAGGGCGC
TCATTGAGCC TAGACATAGG TTATCGCTTC TAG
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| Protein sequence | MLNSKNRFRL TSVAMAITMS FTATVVAAEA KKIESTPEVI VVSGSVLGNS EVADLKTYTG
NRSIITSDQI ERTGVHSIDS ALQQVPGLKI KDETGTGILP NISVRGLDSS RSGYAQVLLD
GIPMTLAPYG HTGQSLFPAT LFMIDRIDVA RGGASVQYGP NNVGGVINLI SKPIPDDWET
HLHERMTFFG EGQTLFDTNI STGGAVNDDF ALRLDGNITK GESFREHSDT DIKNLLLKTV
WNIDERNSLD TSLQYYDAFS ELPGALHTAA YEADSQQSLR PNDEFKADTK RLSMKYSHVL
AGSDTIDYGE FDLTAFGNKS SRNFQWDFYD KNKDTDGNLG SSWSDTTQEA THLRNSPRDF
TVVGIEPKMS LFIDGDVSQH IIAGARYVNE DITYQLNHIE KSTQAAVRPR DWQMDTDAMA
YFISNKIGFL DDSLSVTPGL RYEDVRMTFT NLGQDYSQDN HVTELLPGIT LGYEFTDAWF
AYANAQRSLR TPQISQLWPK GQTLESELSW NYEAGIRFTP TERSNINLAA YRIDFKNKAE
YDRNISMFVN IGQTKNQGIE LEGTYSPLSL PELTLSGAYN YLDTEQLDGE YAGNELPSVS
KHQLSASALY SIDDIDLGLM AYYYSQSFAD LANTVTESVS GTEGEVPAYT VINFNISTEF
FKQDNKGLKV GLSVNNLFDN DYYFRGLDVS PAGRVAAPGR SLSLDIGYRF
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