Gene Sdel_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_0022 
Symbol 
ID8591533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp22419 
End bp23240 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content45% 
IMG OID 
Productnickel ABC transporter, permease subunit NikC 
Protein accessionYP_003303095 
Protein GI268678664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00108936 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAC TGTTGAGTGA TAAATTAGCG ATTTTAGCGC TGTCGATTTT GGCAACGGTG 
GTGATGATGG GAGTTTTTGC TCCTTTTTTT AGCTTGTATG ACCCGCTAGA GCAGAACATT
GCCTTTAAAT TTGCGGGGAT GTCGTGGGAG TATCCTTTGG GGACAGATCA TTTGGGGCGG
TGTATCTACT CACGTTTGGT CTTTGGGATT CGCAACACCG TCTTTTTGGC GATGCTCACG
ATGGTATGTA CCATTGGCAT TGGCGTTGTC ATAGGGGTGA TTTCGGGCTA TTACAAAGGT
GTGGTCGATG AGATGATGAT GCGCTTTTGC GATGTGATGC TCTCTTTTCC CAGTCAAGTG
ATGATTTTAG CCATTGTGGG TGTTTTGGGT GTGGGCATTG AAAATATCAT TATTGCGAAC
ATTGTTATTA AGTGGACGTG GTATGCGAGA ATGATTCGAG GGATGGTGGC AGGCTATAAC
TATAAAAACT ATGTGCTTTT TGCTAAGACG ATTGGCAAGA GCGATAGGTT TATTATCGCA
CGGCATCTGC TTCCTAACAT TAGCTCTGAA ATTGTCGTTT TAGCCACGCT TGATATGGGT
TGGGTTATCA TTAACATCTC AACACTCTCC TTTTTGGGCT TAGGGATTCA GCCGCCTTTT
CCTGAATGGG GTGCGATGCT CAGTGAAGCT AAAAATGTCC TCATGTCCAA TCCTTCGCAA
ATGATAGCCC CAGGGCTTGC CATTTTGGTG GTGGTGGCGA GTTTTAACAT TTTAGGCGAT
GCTCTGCGAG ATATGCTAGA TGTAAGAGGA GCTAACAAAT GA
 
Protein sequence
MKRLLSDKLA ILALSILATV VMMGVFAPFF SLYDPLEQNI AFKFAGMSWE YPLGTDHLGR 
CIYSRLVFGI RNTVFLAMLT MVCTIGIGVV IGVISGYYKG VVDEMMMRFC DVMLSFPSQV
MILAIVGVLG VGIENIIIAN IVIKWTWYAR MIRGMVAGYN YKNYVLFAKT IGKSDRFIIA
RHLLPNISSE IVVLATLDMG WVIINISTLS FLGLGIQPPF PEWGAMLSEA KNVLMSNPSQ
MIAPGLAILV VVASFNILGD ALRDMLDVRG ANK