Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_0022 |
Symbol | |
ID | 8591533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | + |
Start bp | 22419 |
End bp | 23240 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | nickel ABC transporter, permease subunit NikC |
Protein accession | YP_003303095 |
Protein GI | 268678664 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00108936 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGAC TGTTGAGTGA TAAATTAGCG ATTTTAGCGC TGTCGATTTT GGCAACGGTG GTGATGATGG GAGTTTTTGC TCCTTTTTTT AGCTTGTATG ACCCGCTAGA GCAGAACATT GCCTTTAAAT TTGCGGGGAT GTCGTGGGAG TATCCTTTGG GGACAGATCA TTTGGGGCGG TGTATCTACT CACGTTTGGT CTTTGGGATT CGCAACACCG TCTTTTTGGC GATGCTCACG ATGGTATGTA CCATTGGCAT TGGCGTTGTC ATAGGGGTGA TTTCGGGCTA TTACAAAGGT GTGGTCGATG AGATGATGAT GCGCTTTTGC GATGTGATGC TCTCTTTTCC CAGTCAAGTG ATGATTTTAG CCATTGTGGG TGTTTTGGGT GTGGGCATTG AAAATATCAT TATTGCGAAC ATTGTTATTA AGTGGACGTG GTATGCGAGA ATGATTCGAG GGATGGTGGC AGGCTATAAC TATAAAAACT ATGTGCTTTT TGCTAAGACG ATTGGCAAGA GCGATAGGTT TATTATCGCA CGGCATCTGC TTCCTAACAT TAGCTCTGAA ATTGTCGTTT TAGCCACGCT TGATATGGGT TGGGTTATCA TTAACATCTC AACACTCTCC TTTTTGGGCT TAGGGATTCA GCCGCCTTTT CCTGAATGGG GTGCGATGCT CAGTGAAGCT AAAAATGTCC TCATGTCCAA TCCTTCGCAA ATGATAGCCC CAGGGCTTGC CATTTTGGTG GTGGTGGCGA GTTTTAACAT TTTAGGCGAT GCTCTGCGAG ATATGCTAGA TGTAAGAGGA GCTAACAAAT GA
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Protein sequence | MKRLLSDKLA ILALSILATV VMMGVFAPFF SLYDPLEQNI AFKFAGMSWE YPLGTDHLGR CIYSRLVFGI RNTVFLAMLT MVCTIGIGVV IGVISGYYKG VVDEMMMRFC DVMLSFPSQV MILAIVGVLG VGIENIIIAN IVIKWTWYAR MIRGMVAGYN YKNYVLFAKT IGKSDRFIIA RHLLPNISSE IVVLATLDMG WVIINISTLS FLGLGIQPPF PEWGAMLSEA KNVLMSNPSQ MIAPGLAILV VVASFNILGD ALRDMLDVRG ANK
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