Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_4287 |
Symbol | |
ID | 4841579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 5023036 |
End bp | 5024256 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640121565 |
Product | major facilitator transporter |
Protein accession | YP_001052621 |
Protein GI | 126176472 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000504378 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAGTG ATTCAAAAGG TTGCGATAAC CGCAATCACA CCCGTATTCG GGTACTCACA TATTTAATGT TTTTCATGTT CGCTATGACC TCAGATGCCG TGGGCGTCAT TATTCCTGAG TTGATATCCC AGTTTGGTTT GTCCATGTCG CAGGCCAGTG CATTCCATTA TATGCCGATG ATTTTTATCG CGATGAGTGG ACTTTTTTTA GGCTTCTTGG CGGATAAGAT TGGGCGTAAG TTAACCATTC TATTGGGGTT ATTATTATTC GCGCTCGCCT GTTTTATGTT CGCGTTGGGG GAGTCATTTT ACTATTTCTT GTTTCTACTC GCCTTTGTCG GCACGGCGAT TGGCGTCTTT AAAACCGGCG CACTCGGGCT TATCGGCGAT ATCTCGACTT CCTCAAAACA GCATTCGAGC ACTATGAATA CGGTAGAGGG CTACTTTGGT GTCGGCGCCA TGATAGGGCC GGCCATCGTC AGTTATTTAC TGATCAGCGG CGTCTCTTGG AAGTATCTGT ATTTTGGGGC GGGTTGCTTC TGTTTAGTGC TGTGTTGGTT AGCTTATCGG GCGGATTATC CGCAAATCAA ACGTTCCTCG ACAGATGCCA TTAACCTTTC CAGCACCTTT AAGATGATGA AAAACCCTTA TGCATTAGGG TTTTCACTCG CGATAGGTTT ATACGTTGCC ACCGAAGTGG CGATTTACGT GTGGATGCCG ACCTTGTTGC AAAGCTATCA AGGCGATTAC ACCACCTTGG CCGCTTATGC CCTGACGATC TTCTTTACCC TGCGTGCGGG TGGGCGCTTT TTAGGGGGTA GGGTGCTCGA TCGCTTCCCG TGGCAGCAAG TAATGTTCTG GTTTAGCTTC GCGATAAGTG CTTGTTATCT TGGGTCTATG ATCTACGGCA TTGAAGCGGC TGTTGTCTTG CTGCCCTTGT CTGGGCTGTT TATGTCGATG ATGTATCCCA CGCTTAACTC TAAGGGGATT AGCTGTTTCC CCGTGGATCA GCATGGCTCT GTGGCTGGGG GGATTCTGTT TTTTACTGCC GTGTCCGCCG CCGTTGGGCC CTTGTTGATG GGGTTAGTGG GCGATATTTT CGGCCATGTT AAATATGGCT TCTACCTCGC CACTGGTTTT GCCATTTTGT TATGCCTCCT GAGCGGATTT AATCTCGTTA AAGATCCTGC CCGTCATTTG TTAACGGCTG AAGCGCACTA A
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Protein sequence | MVSDSKGCDN RNHTRIRVLT YLMFFMFAMT SDAVGVIIPE LISQFGLSMS QASAFHYMPM IFIAMSGLFL GFLADKIGRK LTILLGLLLF ALACFMFALG ESFYYFLFLL AFVGTAIGVF KTGALGLIGD ISTSSKQHSS TMNTVEGYFG VGAMIGPAIV SYLLISGVSW KYLYFGAGCF CLVLCWLAYR ADYPQIKRSS TDAINLSSTF KMMKNPYALG FSLAIGLYVA TEVAIYVWMP TLLQSYQGDY TTLAAYALTI FFTLRAGGRF LGGRVLDRFP WQQVMFWFSF AISACYLGSM IYGIEAAVVL LPLSGLFMSM MYPTLNSKGI SCFPVDQHGS VAGGILFFTA VSAAVGPLLM GLVGDIFGHV KYGFYLATGF AILLCLLSGF NLVKDPARHL LTAEAH
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