Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3170 |
Symbol | |
ID | 4843070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 3710492 |
End bp | 3711601 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640120429 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001051520 |
Protein GI | 126175371 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000721535 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CCATTATTGC CATTGCCCTG CTTGCGGTTA TCGCCACAGC GGTGAGTTTT AGTGATGTCC TTCAAGCAGC CAAACCCGAA AGCGCCCCCC ACCTTATGCG TACCGTTCCA GTGGTCACGG GGGAAGTCGT TGAATATCCG TTAGCACAAT CTATCTCGCT TATCGGCAAA CTCGCTGCCG AACGCGCGGT GATCATAGCG CCGCAAGTGA CAGGTAAGAT TAAGCAAGTC GCCGTGACCT CAAACCAAGC GGTGAAAAAA GGCCAGTTGC TCATCGAACT CGATGATATG AAAACCCAAG CCGCCGTCGC CGAGGCTAAT GCGTTTCTCA ACGATGAAAA ACGTAAACTC AAAGAATTTG AAAAACTGAT CAGCCGTAAC GCCATCACCC AAACCGAGAT TGACGCACAA AAAGCCAGTG TGGATATCGC CCAAGCACGC TTAGCTTCAG CCCAAGCCGA TTTACATTAC CACTCGCTGA TTGCGCCGTT TGCGGGCAAT ACGGGACTGA TTAATTTCAG CGAAGGCAAG ATGGTCAGCA TAGGCACTGA ATTAATGTCG CTGGATGATT TATCTAGCAT GCGCCTCGAC TTACAAGTGC CAGAGCATTT CCTGTCGCAA TTGAGCATAG GAATGCAAGT GGCGGCCACC AGCCGTGCTT GGCCGGATGA AACCTTTACT GGCAAAGTTG TCGCTATCGA TCCACGCGTC AATGAAGAAA CATTAAACCT TAAAGTGCGG GTGCAATTCG ACAACCCAAA AAATCGCTTA AAACCCGGCA TGATGATGTC ATCCACTATC ACGTTCCCTG CGATTTCAGC ACCTATGGTG CCAGTACAAG CCCTTGAATA TTCAGGCACT AAACGTTACG TGTACGTGGT TAGCGCCGAT CACATCGCCA ACCGCACCGA AGTGCAGTTA GGTGCCCGTA TCGATAACCA AGTCTTGATT GAAAACGGTT TAAAAATAGG TGACAAAGTC GTGGTGCAAG GCTTAGTGAA TATGCGCGAT GGCCTGAAAA TCAATGAAGT GACGCTCGAT GCCAAGGCAT CTACCCGTGC GGCTGAGCTT TCAAGCCCAA AAGCTACGGA GACTAAATAA
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Protein sequence | MKKTIIAIAL LAVIATAVSF SDVLQAAKPE SAPHLMRTVP VVTGEVVEYP LAQSISLIGK LAAERAVIIA PQVTGKIKQV AVTSNQAVKK GQLLIELDDM KTQAAVAEAN AFLNDEKRKL KEFEKLISRN AITQTEIDAQ KASVDIAQAR LASAQADLHY HSLIAPFAGN TGLINFSEGK MVSIGTELMS LDDLSSMRLD LQVPEHFLSQ LSIGMQVAAT SRAWPDETFT GKVVAIDPRV NEETLNLKVR VQFDNPKNRL KPGMMMSSTI TFPAISAPMV PVQALEYSGT KRYVYVVSAD HIANRTEVQL GARIDNQVLI ENGLKIGDKV VVQGLVNMRD GLKINEVTLD AKASTRAAEL SSPKATETK
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