Gene Sbal_0696 details

Gene Information

• Locus tag: Sbal_0696
• Symbol: prfA
• ID: 4842755
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 790631
• End bp: 791722
• Gene Length: 1092 bp
• Protein Length: 363 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640117918
• Product: peptide chain release factor 1
• Protein accession: YP_001049093
• Protein GI: 126172944
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0264279
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGAAT CCGTTATCCG CAAGCTGGAA GGCTTGCTCG AGCGCAATGA AGAAGTCATG 
GCTTTGCTGG GTGATGCTAG CGTCATTTCG GATCAAGACA GGTTTCGCGC GTTATCGAAA 
GAATATGCCC AGTTAGAAGA TGTTGTTGCT GGCTTTAAAG CCTATCAGCA AGCGCAGGTC 
GATCTCGATT CTGCCAAAGA AATGCTGGAA GAAGACGATG CTGAAATGCG CGAAATGGCG 
CAGGAAGAGA TGAAAGCCGC TAAGGCTAAG CTTGAGCATC TTGAAGATGA ACTGCAAATT 
CTATTATTGC CAAAAGATCC CGACGACGAT AAAAACGCCT TCGTTGAGAT CCGTGCTGGC 
GCAGGCGGCG ATGAAGCGGC GATTTTTGCC GGTGACTTAT TCCGCATGTA TAGCCGTTAT 
GCCGAAGCAA ATCGCTGGCA GATCGAAATC ATGAGTTGTA ACGAAGGCGA ACATGGTGGC 
TTCAAAGAAG TGATCATGAA GGTGAGTGGC GACGGCGTAT ATGGCAAACT TAAGTTTGAG 
TCTGGCGGTC ACCGCGTACA ACGTGTGCCA GAAACCGAAT CTCAAGGCCG TGTGCATACT 
TCAGCGGTTA CTGTGGTTGT ATTGCATGAA GTGCCTGAAG CAGAAGCGAT TTCAATTAAC 
CCAGCCGATC TGAAAGTTGA TACTTTCCGT TCATCGGGCG CGGGTGGTCA GCACGTTAAC 
AAAACCGATT CTGCCATTCG TATAACCCAC ATTCCAACGG GGATCGTGGT GGAATGCCAA 
GATCAACGCT CGCAACATAA GAACCGTGCC CAAGCCATGA GTGTACTGGC CGCACGTATT 
CAAGCTCTTG AAGACGAAAA ACGCCGTAGC GCCGAAGAAT CGACCCGTCG TAGTCTGGTT 
GCCAGTGGCG ATCGCTCCGA ACGTGTGCGT ACTTACAACT TCCCGCAAGG CCGCGTGAGC 
GAACACCGCA TCAACTTGAC CTTATATCGC TTGAACGAAG TGATGGAAGG CGATCTCGAT 
GCTATTTTAT TGCCTCTGAT GCAAGAGCAT CAAGCCGATC AGTTAGCCGC ACTGGCTGAC 
GAGCAGGGGT AG 

 

Protein sequence

MKESVIRKLE GLLERNEEVM ALLGDASVIS DQDRFRALSK EYAQLEDVVA GFKAYQQAQV 
DLDSAKEMLE EDDAEMREMA QEEMKAAKAK LEHLEDELQI LLLPKDPDDD KNAFVEIRAG 
AGGDEAAIFA GDLFRMYSRY AEANRWQIEI MSCNEGEHGG FKEVIMKVSG DGVYGKLKFE 
SGGHRVQRVP ETESQGRVHT SAVTVVVLHE VPEAEAISIN PADLKVDTFR SSGAGGQHVN 
KTDSAIRITH IPTGIVVECQ DQRSQHKNRA QAMSVLAARI QALEDEKRRS AEESTRRSLV 
ASGDRSERVR TYNFPQGRVS EHRINLTLYR LNEVMEGDLD AILLPLMQEH QADQLAALAD 
EQG