| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2538 |
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| Symbol | tolB |
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| ID | 7086104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3022381 |
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| End bp | 3023709 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643461431 |
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| Product | translocation protein TolB |
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| Protein accession | YP_002358455 |
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| Protein GI | 217973704 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000186682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000162747 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAATAT TGGCAAAATG GTTAGCATTG GCAGTTCTGC TGTGCACCAC CCCCGCAAAA
GCGGCATTGG ATATTGTGAT CACAGAAGGT GTTGACGCTG CGCGTCCCAT CGCTGTGATG
CCTTTTGTTT GGCAAGGTCC TGGCGCCGCA CCGCAAGCGA TTGCGGATGT AGTGATGTCG
GACTTAGTGC GTAGCGGTAC GTTTAAACCT TTAGACGAAC TTGGACTGCC TCAGCGTAAT
ATTGGCACTG CAGCACAGTT TCAAGCTAAT TCTTGGTCAA GTGTTGGCGC CGAAGCGTTA
GTGCTAGGTA CTGTTAAACC TTATGGTACT GATCAATATC TGGTGAGCTT TGATTTAATC
GATTTAGTCA AAGCCCAAAA CCAAGCGTTG AAAGGCCCAG TTAGTGCAAC AGAATTTTTG
ATGGACAGCC GTCAAACTGT GATTTCAGCG GCGCAATTTC GCCAATATGG ACACAGGATC
AGCGATATCG TCTATGAAAA GTTAACCGGT ATTCGCGGCG CATTCTTAAC GCGGATCTCC
TATGTTGTGG TCAATCATAC TCAAAAAGCC CCTTATCAAT TGATGGTTGC TGATTATGAT
GGCGTCAATG AACAAATGTT ACTGCGCTCG CCAGAGCCGT TGATGTCACC GACTTGGTCA
CCCGATGGTC GTCGTTTAGC GTATGTTAGC TTTGAAAACA AAAAAGCTGA GATCTTCGTG
CAAGACCTTT ATACCCAAGT GCGCACTAAA GTGAGCTCTT TCCCTGGTAT TAACGGTGCG
CCGGCGTTCT CACCCGATGG AAAATCTTTG GCGATCACTT TATCTAAAGA CGGTCAGCCT
GAAATTTACA TCATAGATAT TGCGACCAAA GCCATTAAGC GTATTACCAA TCACTATGCT
ATCGATACTG AGCCATCATG GTATCCTGAT GGAAAGTCGT TGATTTTTAC ATCAGAGCGC
GGTGGTAGAC CACAGATTTA TCGCGTAGAG TTGAGCTCAG GTAAAGTGAG TCGTGAAACC
TTTGAAGGTG AATGGAACCT CGGTGGTTCA ATTACCCCTG ATGGTCGCAG TATGATTTTT
GTTAATCGCA CGAACGGTAA ATTTAATATT GCGCGTATGG ATTTAAGTAC GCGTTTTATG
CAGGTGCTGA CATCGACACG TTTGGATGAA TCTCCAAGTG TTGCCCCTAA TGGTACTATG
GTGATCTATG GCACCACATA CCAAGGCAAG CAAGTATTAG CAGCTGTTTC TACGGATGGA
CGTTTTAAAG CAAGATTACC GGCAGGTCAA GGTGAGGTGA AATCACCTTC TTGGTCACCG
TTTCTCTAA
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| Protein sequence | MRILAKWLAL AVLLCTTPAK AALDIVITEG VDAARPIAVM PFVWQGPGAA PQAIADVVMS
DLVRSGTFKP LDELGLPQRN IGTAAQFQAN SWSSVGAEAL VLGTVKPYGT DQYLVSFDLI
DLVKAQNQAL KGPVSATEFL MDSRQTVISA AQFRQYGHRI SDIVYEKLTG IRGAFLTRIS
YVVVNHTQKA PYQLMVADYD GVNEQMLLRS PEPLMSPTWS PDGRRLAYVS FENKKAEIFV
QDLYTQVRTK VSSFPGINGA PAFSPDGKSL AITLSKDGQP EIYIIDIATK AIKRITNHYA
IDTEPSWYPD GKSLIFTSER GGRPQIYRVE LSSGKVSRET FEGEWNLGGS ITPDGRSMIF
VNRTNGKFNI ARMDLSTRFM QVLTSTRLDE SPSVAPNGTM VIYGTTYQGK QVLAAVSTDG
RFKARLPAGQ GEVKSPSWSP FL
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