Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2010 |
Symbol | |
ID | 7086844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2371771 |
End bp | 2374347 |
Gene Length | 2577 bp |
Protein Length | 858 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643460913 |
Product | Glucan 1,4-alpha-glucosidase |
Protein accession | YP_002357937 |
Protein GI | 217973186 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00769756 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000340276 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAATCGA GTCCTACGCC GCAGCAGGAT CTGCACACTA GCCAAACCCG TCACGCACAA ACGTTAACAA GGCGCAGCCG CCTAGCGCTT GCCGTCGCCG CAAGTCTATT AGGGACAATA GGATTCACTG CTTGTTCACC CACATCGAAT TCAGCAACAC CAAGCATGAG TGGCAATGCC GCATCAAATG TGCAGCTGGT TGCGCCCGGC GCACCGGGTA AAGCACCGAC TTGGGCATTT TCGGGTAAAA CCGGTATTGG AACGTCGTAC GAGCCTTACA CCCAAGGTCA ATACCAAGAT GCCAAGCAGA ATCCTATTAG CCGCGTTTGG TTCTCCCTCG CCCAAGGTAT TTTAACCGAA ACCATGTATG GTCTTATTCA CAATGCGCAG CTCAAAGAAC TGCAATTTGT GATCACGGGA AATGGCTTTG TCGATACAGA AAAAGATAAC ACCATCAGCA GCATAGAATA TTTAGATACA GATGCTAATG GTCGCCCACA ATCCCTTGCC TATAAAATTA TCAATAAAGA TATTGAAGGT AAGTATCAGA TTGAAAAGCA TATCTTTACC GATCCTGACC GCGACACCCT AATGATGCGC GTCACCTTTA CCGCCTTTGA AGACGGCATT ACGCCGCATT TGTATGTCAA TCCGCATATC GATAACGCGG GCGCCAATGA TATCGGCCGC ATCGACACTA ATACAGACAA TCATACCAAC ACACATGCTG GCAATCAGGC GCTGGTGGCC TATACCGCCG CCAAAGACAG CAGCGTGATG ACGGTCAAAT CCGAGCTGAA TTTTGTGCAG GCAACGACAG GCTTTGTCGG TGTCTCCGAT GGCCTAGCCG ATTTGGCCGA TAACGGCACA CTCGATACGC CCTATCAAAC GACCAGTGCG CAAGATAAAT CGACCGTTGG CAATATCGCC TTTACTGCGA GTTACCCTAC GCTCATCAAA GCCAAACCCG TCACTTTTAA TCTCGCCATC GGTTTTGGTA AAGATGAAAC CCAGAGTTTA GCCAATGCCG ATGCCACTTT GGCCGCAGGT TATGATGCTG TGCTGAGCGC CTATAAAGGC GATGCCACCC ATGTCGGCTG GCACGATTAC TTAAGCTCGC TGCCCGCCAT CGCAAACATG GCCAACAACA CCACAGATAG CGGTAAGCTG CTGTATACCA GTGCTATGGT CTTGAAAGCG CAGGAAGATA AAACCTATGC GGGCGCACTT ATCGCCTCGT TATCCAATCC TTGGGGCGAT ACGGTTTCAG CAGCCGTGCC GAGTACTGGC TATAAAGCGG TATGGCCGCG TGACTTTTAC CAATGTGCCA TGGCATTCCT CGCCATGGGT GACACCCAAA CGCCCAAAGT GGCCTTCGAA TACCTGGAAA AAGTGCAAGT GACCGAAATG ACGCCCGGCT TTACGGGTAC GCCGGGTTGG TTCCTGCAAA AGACCCATGT GGATGGCCAA ATTGAGTGGG TTGGTGTGCA GCTCGATCAA ACCGCCATGC CTATCATGCT CGGCTGGAAA CTCTGGCAAG CGGGTGTGCT CACCCCTGAT GAGATCAGTC ACTGGTATCA AGAGATGCTC AAAGGTGCTG CAGACTTCTT GATCAGTGGC GGTGAGGTCA ATCTGGATTG GAATCACACT CAAATCGCCC CGCCAAAAAC CCAGCAAGAG CGTTGGGAAG AACAAGCGGG TTACTCACCC TCGACCACGG CCGCAGTGAT CGCAGGTCTT GTTGCCGCGA GTGAAATAGC CAATGAAGCC AAGGATCCCG ACTCCAGCAG CCGTTATCTT GCCGCCGCCA AAGACTTAAG TAATAGTTTA GAAAAACACT TAGTCACCAC CCAAGGACTA CTAAAAAACA GCGCAGGCGT CAGCGCGCCT TACTATTTAC GTTTAAGCCC GAATGGCGAG CCAAACACCG CCGATACACT GGCGGCGAAT AACGGTAAGC AAGGTTTAGA TCAGCGTCAG ATCCTCGATG GCGGATTTTT AGAACTAGTA CGTTATGGCG TGCGCGGTGC AACTGATAAG CTGATCAATC AAAGCCTTCA ATTGATTGAT AACACTGAAC TTGACTCTAA TTTGCGCCTT AAATATGAGT TTACCGCTAA AGATGGCAGC AAAATCCCAG GCTTTAGACG TTATGGCAAC GATGGCTACG GTGAGGATAC GGTTTCTGGC AAGAACTATG CGGAATCGGG CAGCAACAGC GCCGATCAAC GTGGCCGCGT CTGGCCCTTC TTCACCGGTG AGCGCGGTCA TTTTGAATTA GCACTCGCCC AAGAAAAAGG CGAGCTAACA GGCAATAACT CGCAGCAAAC CAAGCAGCAT TTGATCAACA CCTATGTGCA AGGCATGGAA ACGTTTGCGA ATGCGGGCAT GATGTTACCC GAGCAAGCGT GGGACGGTGT CGGCGATGCC ACCCGCTACC ATTACCAACT CGGACAAGGC ACTAACTCAG CCACGCCGCT AGCCTGGACC CATGCCGAAT ACATTAAACT GGTGCGCTCA ATGACCGACG GCCAAGTCTG GGATAACTAC CCTATCGTCC CAGCGGCATT GAAATAA
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Protein sequence | MESSPTPQQD LHTSQTRHAQ TLTRRSRLAL AVAASLLGTI GFTACSPTSN SATPSMSGNA ASNVQLVAPG APGKAPTWAF SGKTGIGTSY EPYTQGQYQD AKQNPISRVW FSLAQGILTE TMYGLIHNAQ LKELQFVITG NGFVDTEKDN TISSIEYLDT DANGRPQSLA YKIINKDIEG KYQIEKHIFT DPDRDTLMMR VTFTAFEDGI TPHLYVNPHI DNAGANDIGR IDTNTDNHTN THAGNQALVA YTAAKDSSVM TVKSELNFVQ ATTGFVGVSD GLADLADNGT LDTPYQTTSA QDKSTVGNIA FTASYPTLIK AKPVTFNLAI GFGKDETQSL ANADATLAAG YDAVLSAYKG DATHVGWHDY LSSLPAIANM ANNTTDSGKL LYTSAMVLKA QEDKTYAGAL IASLSNPWGD TVSAAVPSTG YKAVWPRDFY QCAMAFLAMG DTQTPKVAFE YLEKVQVTEM TPGFTGTPGW FLQKTHVDGQ IEWVGVQLDQ TAMPIMLGWK LWQAGVLTPD EISHWYQEML KGAADFLISG GEVNLDWNHT QIAPPKTQQE RWEEQAGYSP STTAAVIAGL VAASEIANEA KDPDSSSRYL AAAKDLSNSL EKHLVTTQGL LKNSAGVSAP YYLRLSPNGE PNTADTLAAN NGKQGLDQRQ ILDGGFLELV RYGVRGATDK LINQSLQLID NTELDSNLRL KYEFTAKDGS KIPGFRRYGN DGYGEDTVSG KNYAESGSNS ADQRGRVWPF FTGERGHFEL ALAQEKGELT GNNSQQTKQH LINTYVQGME TFANAGMMLP EQAWDGVGDA TRYHYQLGQG TNSATPLAWT HAEYIKLVRS MTDGQVWDNY PIVPAALK
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