Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1925 |
Symbol | |
ID | 7090092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2275427 |
End bp | 2276614 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643460829 |
Product | aromatic amino acid transporter |
Protein accession | YP_002357853 |
Protein GI | 217973102 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00166231 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.036415 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACAGA ATAAAATTTT CGGCAGTTTG CTGCTTATCG CAGGCACCAC TATCGGCGCG GGTATGCTGG CTTTGCCTAT CGCATCGGCG GGACTTGGTT TTGGCACGTC CTCCGCCATC ATGTTGATCC TGTGGGCGCT AATGGCCTAC ACGGCACTGC TTATGGTGGA AATCCATCAA TTCGCCCCCA GCGATGCCAG CCTTAATCAC TTGGCGCAAC GCTTATTAGG TCGTAAGGGC CAGTTGATCG CCAATAGCGC CTTGATGTTT TTACTGTACG CCCTTTGCGC CGCCTACATT GCCGGTGGCG GTGAGCAAGT GAACCAAAAG CTGAGCACTT GGCTAGGGCT AAGTTTGCCA CCACAGGCGG GCGCCATCCT GTTTACCTTG CTGATTGGGG TGATTGTGGG CATGGGAACT CACTGTGTGG ACCTTATCAA CCGCGGTTTG TTTGCCCTTA AGCTATTGGC ATTACTGCTT ATGTTGGCCT TGTTACTGCC GCAGGTAGAA AGCCCACATT TACTCGAACT CCCACTTAAC CAAGGTTTGA TTATCACGGC TATTCCGGTG ATTTTTACCT CCTTTGGTTT CCACGGGTCG ATTCCATCAG TGGTGCGCTA CTTAGGGGTT GAGGTCAAAG CCCTGCGCAG GATCATGCTA CTCGGCTCAG CTTTACCACT GGTCATTTAT CTTTTGTGGC AAGTAGGTAG CCAAGGTGTA CTGAGCCAAA GCCAATTGCT CGAAAATCAG AGCTTATCGA GCTTTATCAA TCAACTGGCG AGCGTACTGC ACAGCGAATA CTTAAGCAGC GCGATCAGTT TGTTTGCCGA TCTCGCTCTT GCGACTTCGT TTTTAGGGGT GAGTTTAGGC TTGTTCGATT TTATGGCCTC GACCTTAAGA CGAGAGGATG ATTTTTCTGG TCGTAGCCTA ACCGCTGCCA TCACCTTTTT ACCACCCTTA GGTTTCGCCC TCTTCTACCC CCAAGGTTTT ATCACAGCCC TGGGTTATGC GGCGATTGCA CTGGTGATCC TCGCCATCTT TTTACCTGTG GCCATGGTGT GGAAACAGCG CCAGACGCGA GATGCGGCCA ATATGCCGAC GGGATATCGG GTCGCGGGCG GCAAGTTTGC CTTAATGCTC GCCACACTTT GCGGAATAGT GGTTATCGCC GCGCAGATGT TTAGCTAG
|
Protein sequence | MTQNKIFGSL LLIAGTTIGA GMLALPIASA GLGFGTSSAI MLILWALMAY TALLMVEIHQ FAPSDASLNH LAQRLLGRKG QLIANSALMF LLYALCAAYI AGGGEQVNQK LSTWLGLSLP PQAGAILFTL LIGVIVGMGT HCVDLINRGL FALKLLALLL MLALLLPQVE SPHLLELPLN QGLIITAIPV IFTSFGFHGS IPSVVRYLGV EVKALRRIML LGSALPLVIY LLWQVGSQGV LSQSQLLENQ SLSSFINQLA SVLHSEYLSS AISLFADLAL ATSFLGVSLG LFDFMASTLR REDDFSGRSL TAAITFLPPL GFALFYPQGF ITALGYAAIA LVILAIFLPV AMVWKQRQTR DAANMPTGYR VAGGKFALML ATLCGIVVIA AQMFS
|
| |