Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1888 |
Symbol | |
ID | 7090055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2230852 |
End bp | 2231490 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643460792 |
Product | uridine kinase |
Protein accession | YP_002357816 |
Protein GI | 217973065 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0572] Uridine kinase |
TIGRFAM ID | [TIGR00235] uridine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000127737 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0259304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCTC AGCAGTGTGT CATTATTGCA ATTGCTGGCG CGTCAGCATC GGGCAAAAGT TTAATTGCCA AAACGATTTT TGACGAATTA CGCCGCGATT TAGGCACAGA TCAAATTGGG GTAATTAATG AAGACGCGTA CTATCGCGAT CAGAGTCATT TATCCATGGA TGAACGGGTA TTAACGAATT ACGATCATCC CAAAGCGTTG GACCATCAAC TGTTGTGCAC CCATTTACAG TTGCTCAAGT CTGGCGAAGC TGTTGATATC CCTTGTTATA GCTACACAGA ACACACTCGT ATAGCAGAAA CCCTGACTAT GACACCGAAA AAGGTGATCA TTTTAGAAGG TATCTTACTG CTGACCGATC CTAAATTACG TGCGCTGATG GACGCGAGTG TGTTTATGGA CACACCGTTG GACATTTGTT TCCTACGTCG CCTAACCCGT GATGTGGCTG AACGCGGTCG TACGATGGAA TCTGTGATTT CTCAGTACAA GAAAACTGTG CGTCCTATGT TCTTACAGTT TATCGAACCG TCGAAACAAT ACGCCGATAT TATCGTTCCC CGTGGCGGTA AGAATCGTAT TGCGACCGAT ATTTTAAAAA CTCGTATCCA ACATTTACTG GCAAAATAA
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Protein sequence | MNSQQCVIIA IAGASASGKS LIAKTIFDEL RRDLGTDQIG VINEDAYYRD QSHLSMDERV LTNYDHPKAL DHQLLCTHLQ LLKSGEAVDI PCYSYTEHTR IAETLTMTPK KVIILEGILL LTDPKLRALM DASVFMDTPL DICFLRRLTR DVAERGRTME SVISQYKKTV RPMFLQFIEP SKQYADIIVP RGGKNRIATD ILKTRIQHLL AK
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