Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1792 |
Symbol | |
ID | 7088326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2109786 |
End bp | 2110670 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460696 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_002357720 |
Protein GI | 217972969 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000368333 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000000144356 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATAAACG GAAGCATCGT AGCCTTAATC ACGCCAATGA ACAGTGATGG CTCAGTAGAT TTTGCAAGTC TTGAAAGGTT AGTCGAATTC CATATTGACC AAGGCACAGA TGCCATTGTG GCCGTTGGTA CTACTGGCGA GTCAGCGACT CTGCCTATGT CTGAGCATGT AACGGTCGTT TCACAAACCG TTAAGTTTGC TGCGGGCCGC GTTCCTGTCA TTGGTGGCAA TGGTGCCAAT GCCACATCTG AAGCCGTTGA GCTCACCAAG TCCTTATCTA AGGTGGGTGT TGCCGCTATG CTTGGCGTAA CGCCATATTA TAATAAGCCA ACTCCTAAGG GATTGATTGC GCATTATAAA GCCGTGGCTG CCAGCACAGA TATTCCACAA ATTCTTTATA ATGTCCCTGG CCGTACTGCC GTTGATATGT TGCCAGAAAC CGTTGCCGAG TTAGTCAGCG TTAGCAACAT TATTGGCGTG AAAGAAGCGA CCGGTGACTT ATCCCGTGTA AAACGTCTGC GCGAACTGTG CGGCGACGAT TTCCTTTTGT ATAGCGGCGA TGATGCCACT GCCAGAGAGT TCTTACTCTT AGGCGGCAAT GGCGTGATTT CAGTGGCGAA CAACATAGTG CCACAAGCCT TTAAAGCTAT GTGTGATGCG GCGCTTGCCG GTAATGCTGA GCTTGCGCTG AGCATAGACA CACCACTGCG CGGTTTATAC AGCACACTCT TTTGTGAAGC CAATCCTATC CCTGTTAAAT GGGCTGCCCA TCGCATGGGT TTGATTGAAT GTGGCCATAT TCGTTTACCT TTGACTGAAC TTTCTGAGCA ATGTCATGGT CTGTTGATAG AAGCAATGAC TCGTGCCCAG ATAGAGGTTA AATAA
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Protein sequence | MINGSIVALI TPMNSDGSVD FASLERLVEF HIDQGTDAIV AVGTTGESAT LPMSEHVTVV SQTVKFAAGR VPVIGGNGAN ATSEAVELTK SLSKVGVAAM LGVTPYYNKP TPKGLIAHYK AVAASTDIPQ ILYNVPGRTA VDMLPETVAE LVSVSNIIGV KEATGDLSRV KRLRELCGDD FLLYSGDDAT AREFLLLGGN GVISVANNIV PQAFKAMCDA ALAGNAELAL SIDTPLRGLY STLFCEANPI PVKWAAHRMG LIECGHIRLP LTELSEQCHG LLIEAMTRAQ IEVK
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