| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1258 |
|---|
| Symbol | |
|---|
| ID | 7089821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1487944 |
|---|
| End bp | 1489056 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643460164 |
|---|
| Product | permease YjgP/YjgQ family protein |
|---|
| Protein accession | YP_002357191 |
|---|
| Protein GI | 217972440 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000016572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000115983 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGATTGTAT TTAAATACCT TATTCGAGAA GTTTTAAAGG CACAAATTGC GGTACTTTTA
GTGCTGTTAA CTATTTTTAT TAGCCAGCAT TTCGTGCGTA TACTGGCCGA TGCCTCCGAC
GGCGATTTTC CCGCCTCTTT AATCATGACC CTGATTGGGC TTAACTTGCC TTATCTGGTT
ATCTTAGTCC TGCCGTTAAG TTTGTTCTTG GGGATTTTAC TAGCCCATGG CCGTATGTAT
TCCGAAAATG AGATGGTCGT TCTCCACGGT GTTGGGGTCA GTGAGTGGTA TGTCACCCGC
GTGACGCTGA TTCTTGCCGT GATCAATATG TTGTTTACCG GCTATTTATC CCTTTATGTC
GCCCCTTGGG CTGAAGAGCA GCAAAACCAA GTGCTCGAAA AAGCCCAGTC CGAAGCTGGG
CTTGCGGCCT TAGTGCAAGG TCGTTTTCAG GCGAGTCCGA ATGGCCGCGC GGTATTATTT
GTTGAACGTA TCGGTAAAGA CAACGAGTTA GATAAAGTGT TTGTGGCCCA GTTGCCAGAC
CCTGATGACG AAACCGGCGT CACCAATGTG GTGGTGGCCA AAGGTGGGCG AGTGCAGGAA
GATAGTTCAG GCGCGCAGCA ATTGAACCTC AATGATGGCG TGCGTTATCA AGGCAGCCCG
AAGGCGAAGG ACTACCAAAT GATCGAATTT GGTGGTTATA AAATGCAAAT TAAAGAGCAG
CAAGTCGACG AGCGTCGGCG TAAGTTATCT GCGCTGCCTG TCGATGAACT CGTGAAAATC
GAAGGGGCGG AAGCCGTTGC CGAATTCCAT TGGCGTCTTG CCATTCCACT GGCGATTCCG
ATCATGACCT TGATTGCGGT GCCTCTGGCG CGGGTGAATG TGCGTCAGGG CAAGTTCGCT
AAAATGTTCC CAGCAGTACT CTTGTACCTT GGCTATTTTG GCCTCATGGT CGCCGGACGT
AAGGCATTGC AAGATGGGAT TATTCCACTG TATTTAGGCA TGTGGTGGAT CCATATTTCG
GCGCTCTTGA TGGGGCTGTT CTTGCTCGGC AAAGATAGGC CTATATTTAG TCGTATCTCG
ACCCTGTTTG CCCATAAGAA GGTGGCGGCA TGA
|
|---|
| Protein sequence | MIVFKYLIRE VLKAQIAVLL VLLTIFISQH FVRILADASD GDFPASLIMT LIGLNLPYLV
ILVLPLSLFL GILLAHGRMY SENEMVVLHG VGVSEWYVTR VTLILAVINM LFTGYLSLYV
APWAEEQQNQ VLEKAQSEAG LAALVQGRFQ ASPNGRAVLF VERIGKDNEL DKVFVAQLPD
PDDETGVTNV VVAKGGRVQE DSSGAQQLNL NDGVRYQGSP KAKDYQMIEF GGYKMQIKEQ
QVDERRRKLS ALPVDELVKI EGAEAVAEFH WRLAIPLAIP IMTLIAVPLA RVNVRQGKFA
KMFPAVLLYL GYFGLMVAGR KALQDGIIPL YLGMWWIHIS ALLMGLFLLG KDRPIFSRIS
TLFAHKKVAA
|
|---|
| |