Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0871 |
Symbol | |
ID | 7087232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 1023169 |
End bp | 1024083 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643459785 |
Product | Glutamate--tRNA ligase |
Protein accession | YP_002356812 |
Protein GI | 217972061 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000393825 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACTT TATCTTCTCC AACTTCAACT CATCGCCCCT ATGTCGGCCG TTTTGCGCCT TCGCCTTCGG GTGCCTTGCA CTTTGGCTCG CTTATCGCCG CCCTTGGCAG TTATCTGCGT GCGCGCTCGC AACAGGGTAA GTGGCTGATT CGTATTGAAG ACATCGATCC TCCACGGGAA GTCAAAGGCG CCGCCGATGA TATCTTGCGC ACCTTAGAAG CCTATGGGTT TGAATGGGAT GATGTGCCTC TGTATCAGAG CCAGCGCACT GCGGCCTATC AAGCACAAAT TGATTCGCTG CTCGCCCAAG ATAAAGCCTA TTTCTGCCAA TGTAGTCGCA AGCAAATTCA AGCCATGGGC GGCGTCTACG ATGGCCGCTG TCACCGCTTG CCACAAACCC AAGCTGCAAA TGTGGTTAAG TCTGGGGCGG TGCGGATAGT CAATACCGCG CAAGTGCAGC AATTTGACGA TAACCTCATG GGGCATATTC GCGTCGATAG CCATTTTGCC GCCGAGGATT TCATCATCAA ACGTAGCGAT GGCCTATACG CCTATCAATT GGCCGTGGTG CTCGACGATG CCTATCAAGG GATCACTGAA GTGGTTAGAG GTTGTGACTT AATCGAAGCC AGTTGTCGCC AACTGAGTTT GTATCAAAAC TTTGGCTTGG CTGCACCGCA ATGGTTGCAC TTGCCGCTTG CCTGTTTGAG CAAGGGATTT AAACTCTCCA AACAGAATCA TGCGCAGGCG ATTGATACGC TTCATCCGCA GTCGAGCCTC AATGCGGCGC TGGCATTTTT AGGTCAACAA ACTGTTGAGA CCCAAGGTTC TGTGGCGCAA ATGCTCGTTC AAGCCGTGGA TCAGTTTCAA TTATCCACTA TACCGCAACA ATCTGAGATA CTGATCGAGC CCTGA
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Protein sequence | MATLSSPTST HRPYVGRFAP SPSGALHFGS LIAALGSYLR ARSQQGKWLI RIEDIDPPRE VKGAADDILR TLEAYGFEWD DVPLYQSQRT AAYQAQIDSL LAQDKAYFCQ CSRKQIQAMG GVYDGRCHRL PQTQAANVVK SGAVRIVNTA QVQQFDDNLM GHIRVDSHFA AEDFIIKRSD GLYAYQLAVV LDDAYQGITE VVRGCDLIEA SCRQLSLYQN FGLAAPQWLH LPLACLSKGF KLSKQNHAQA IDTLHPQSSL NAALAFLGQQ TVETQGSVAQ MLVQAVDQFQ LSTIPQQSEI LIEP
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