Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0738 |
Symbol | alr |
ID | 7088130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 877526 |
End bp | 878602 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643459650 |
Product | alanine racemase |
Protein accession | YP_002356680 |
Protein GI | 217971929 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0231981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000000814721 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGAACCCTT TTCCCCGTGC AGAAATTAGC AGTAGTGCAC TGCAAACCAA TCTCGCTGCG TTGCGTCAAC AGGCACCAGC GAGTCGCGTG ATGGCCGTCG TTAAAGCGAA CGGCTATGGT CATGGATTAT TAAATGTCGC CCATTGTTTA GTCAGTGCCG ATGGTTTTGG CTTAGCACGA TTGGATGAAG CCTTAGAATT ACGAGCGGGC GGCGTGACAG CGCGTTTGTT ATTACTGGAA GGTTTTTTCC GCGCCACCGA TCTCCCGTTA CTCGTCGGGC ATGATATCGA CACTGTGGTG CACCATAGCT CTCAGCTTGA GATGTTAGAG CAAACTGTGT TGTCTAAACC TGTCACTGTT TGGCTGAAAG TGGATTCAGG TATGCATCGC TTAGGCTTTA CGCCCGAGCA ATTCTCAACG GTTTACGACC GATTAATGGC CTGTCCCAAT GTGGCAAAAC CGATTCATTT GATGACGCAT TTTGCCTGTG CAGATGAGCC AGATAACACT TATACCTCAG TGCAGATGGC GGCTTTTAAT TCCTTAACGG CTGGCTTACC CGGATTTAGA ACCTTAGCCA ACTCCGCCGG TGCCTTGTAT TGGCCGCAAA GCCAAGGCGA TTGGATCCGT CCGGGAATCG CACTCTATGG TGTGTCACCT GTCACTGGAG ATTGCGGTGC GAATCACGGA CTAGTACCTG CGATGGAACT GGTATCACAG TTGATTGCGG TGCGGGATCA TAAAGCCAAT CAGCCTGTAG GTTATGGTTG TTTCTGGACC GCGAAGCAAG ATACCCGTTT AGGTGTCGTC GCAATTGGTT ATGGTGATGG TTATCCCCGC AATGCACCGG AAGGTACACC TGTGTGGGTT AATGGTCGTC GCGTACCCAT AGTTGGCCGC GTCTCTATGG ACATGTTGAC TGTCGACTTA GGCCAAGATG CGCAAGATAA GGTTGGCGAC AGTGCTTTGT TGTGGGGTAA AGCATTACCC GTTGAAGAAG TCGCTGAACA TATCGGTACT ATCGCTTATG AATTAGTCAC TAAGCTCACC CCAAGGGTTG CGGTTTGTCT AGCTTAA
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Protein sequence | MNPFPRAEIS SSALQTNLAA LRQQAPASRV MAVVKANGYG HGLLNVAHCL VSADGFGLAR LDEALELRAG GVTARLLLLE GFFRATDLPL LVGHDIDTVV HHSSQLEMLE QTVLSKPVTV WLKVDSGMHR LGFTPEQFST VYDRLMACPN VAKPIHLMTH FACADEPDNT YTSVQMAAFN SLTAGLPGFR TLANSAGALY WPQSQGDWIR PGIALYGVSP VTGDCGANHG LVPAMELVSQ LIAVRDHKAN QPVGYGCFWT AKQDTRLGVV AIGYGDGYPR NAPEGTPVWV NGRRVPIVGR VSMDMLTVDL GQDAQDKVGD SALLWGKALP VEEVAEHIGT IAYELVTKLT PRVAVCLA
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