| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0402 |
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| Symbol | radC |
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| ID | 7089540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 448520 |
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| End bp | 449197 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643459322 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_002356359 |
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| Protein GI | 217971608 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000130829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000166485 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCATTA AAGATTGGCC TGAGGGGGAA GGTCCCAGAG ATAAACTGTT ACAAAAAGGG
GCGGGACAAC TGTCGGATGC GGAGTTATTG GCGGTATTAC TGCGGAACGG TTTGGCGGGA
TTAAACGCGG TTGATCTTGC AAGGTCGCTT ATTAGCGAGT TTGGCGGCCT CAGAAACCTG
CTTTGTGCTC CTCGAAATCA GGTGTGTCGA CTTCCGGGCG TAGGACCTGT AAAATACGCC
CAGCTTCAAG CTGCGGCCGA ATTAGCGCGG CGTGTAGCGC AGGAAAATCT GCAAAGAGGT
CAAGTTTTAA CAAATCCCGA TTTAACTCGG GACTATTTAA TGAGACAATT GGCCGATCGC
TCCTATGAAG TGTTCGCAGT TTTACTGCTG GATAGCCAGC ATAGAGTGAT TCAATTTGTC
GAATTATTCC GCGGTACAAT AGACTCAGCC TCAGTGTACC CACGTGAAGT GGTGAGCTTA
GTGCTGGAGA AAAAGGCCGC AGCAGTTATA GTTTGTCATA ATCATCCGTC TGGTATTGCC
GAGCCCAGTC AGGCTGACCG ACGAATAACT GAGCGATTAA AAAATGCGTT AGCAACCATA
GACGTATCCT TATTGGACCA TATGGTTGTA GGTGATCGAG AGATAGTTTC TTTTGCAGAA
CGAGGCTGGA TTAATTAA
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| Protein sequence | MGIKDWPEGE GPRDKLLQKG AGQLSDAELL AVLLRNGLAG LNAVDLARSL ISEFGGLRNL
LCAPRNQVCR LPGVGPVKYA QLQAAAELAR RVAQENLQRG QVLTNPDLTR DYLMRQLADR
SYEVFAVLLL DSQHRVIQFV ELFRGTIDSA SVYPREVVSL VLEKKAAAVI VCHNHPSGIA
EPSQADRRIT ERLKNALATI DVSLLDHMVV GDREIVSFAE RGWIN
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