| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0256 |
|---|
| Symbol | |
|---|
| ID | 7085915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 295125 |
|---|
| End bp | 295811 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643459179 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002356216 |
|---|
| Protein GI | 217971465 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000272342 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000106333 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGGA TATTATTAAT CGATGACGAT CTGGGTTTAT CGGAGCTACT AGGGCAACTG
CTCGAGTTAG AAGGGTTTCA ATTAACCTTG GCCTACGACG GTAAACAAGG TTTAGATCTG
GCACTGAGTG CGGATTACGA TCTGATCTTA CTCGATGTCA TGCTGCCTAA ATTGAACGGC
TTCGAAGTCC TGCGTGCACT GCGTCAGCAC AAGCAAACGC CAGTATTAAT GCTGACCGCC
CGCGGCGATG AAATCGATCG CGTAGTTGGG CTTGAAATCG GCGCCGATGA TTATCTGCCA
AAGCCGTTTA ATGACAGAGA ATTAATCGCC CGTATCCGCG CAATTATTCG TCGCTCGAAC
TTAACAACCC AAGAAATCCA TGCCGCGCCC GCCCAAGAAT TTGGCGATTT ACGCTTAGAC
CCATCGCGCC AAGAGGCTTA TTGTAACGAG CAGTTAATCA TACTTACAGG CACAGAATTC
ACTCTGCTGC ACACCCTCGC GCTGCACGCG GGAGAGTTGA TGAATAAGGA AGAGTTAAAC
GAGAAAGTGC TCGGCAAAAA ACTCATGCCC TTCGATCGCA GCTTAGACAT GCATTTATCG
AATCTACGTA AAAAACTCCC CGAGCGTAGC GATGGGCGGC CAAGGGTGAA AACTATCCGT
GGCAAAGGTT ATATTTGGCT TCCATAA
|
|---|
| Protein sequence | MSRILLIDDD LGLSELLGQL LELEGFQLTL AYDGKQGLDL ALSADYDLIL LDVMLPKLNG
FEVLRALRQH KQTPVLMLTA RGDEIDRVVG LEIGADDYLP KPFNDRELIA RIRAIIRRSN
LTTQEIHAAP AQEFGDLRLD PSRQEAYCNE QLIILTGTEF TLLHTLALHA GELMNKEELN
EKVLGKKLMP FDRSLDMHLS NLRKKLPERS DGRPRVKTIR GKGYIWLP
|
|---|
| |