Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3190 |
Symbol | |
ID | 5754982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3760403 |
End bp | 3762253 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641289511 |
Product | hypothetical protein |
Protein accession | YP_001555612 |
Protein GI | 160876296 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000502664 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.261555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAATAA AAACTAAAAT CAGCTTAGTC GCACTGACCC TTTCAGCTCT ACTGACCATT CCCGCGTATG CAGCATCAAG CTCGCCAGCC TTACACAGTG CAAGTGAACC TATGAATGCA GTGGTGCAAA CCGAATCAGA CAAAGCCAAT GCGTTGTTCG AAACCATCTT CATGGAAAAC ATCATGGCGA GCCCCATTTC GCAAACCTAT ATGGGGATCA AGCAAGACTA TGATAAATGG GATGAACTGG GTGATGCCGC CGATGATAAA GCCCTAGCGC GCACGAAAAA ACAACTGGCG CAGGTCAATC TGATTGATGC GGCCAAACTC GATCCACAAA CAAACCTCAG CCTCACCTTA CTCAAACAAA ATCTGCAAAA TGACATCGAA GATGACCAAT GGCGCTACCA TAATTACCCT GTAAATCAAA TGTATGGCGG CCACTCTATG ATAGCCTCCT TCTTGATTAA CCAACATCAA ATCACAGATG TCAGCGATGC CAAGGCCTAT ATCAGCCGCT TAAATGGCGT GCCAAAACGC TTAAGTCAAT TACAGACAGT ATTAGACGTT CGCGCAGATA AAGGCATTAT CGCGCCTAAG TTCGTATTCG CTTATGTCAT TTCAGACAGC CAAAACATCA TCAAAGGTGC GCCTTTTGAT AAGGGCGACG ACAGCGCGCT ACTCGCAGAT TTTCGCCGTA AAGTGAACGC ATTAGCGATT AAAGAAACGG AAAAGCAAGC ACTGCTTAAA CAGGCTGAGC ATGCACTAGT AACTCAAGTC GAGCCCGCCT ATAACAAGCT CATCAGTTAC ATCAAAACCT TAGCAACCAG AGCTGACGAC CGCGATGGTG CGTGGAAACT CCCTAATGGC GCGGCCTTTT ACAATAATGC TTTGGCCCGC ACTACCACCA CAAATATGAC CGCCGATCAA ATCCATGACT TAGGGCTTTC TGAAGTGGAA CGTATCCACA ACGAAATGCG CGCCATCATG AAGAAGGTCA ATTTTAAAGG CGATTTACAG CAATTCTTTA GCTTTATGCG TGACGATCCC CAGTTCTACT ACCCCAATAC CGCCGAAGGT AAAGCCGCTT ATTTAGCAGA GGCGACTAAG CTCATCGACA ACATGAAATC GCGCTTGGAT GAAGTGTTCA AAGTAAAACC TAAGGCCGCC ATGATAGTCA AACAGGTTGA AGCCTTTAGG GAAAAATCCG CAGGTAAAGC CTTCTATGAA CAACCAGCCC CGGATGGTTC TCGGCCCGGC AGTTATTACG CGAATCTGTA TGATATGAAA GCCATGCCGA AATACCAAAT GGAGGCACTG GCCTACCACG AGGGTATTCC GGGTCATCAC ATGCAGATCG CCATTTCCCA AGAGCTGCAA AATATTCCTA AGTTCCGCAA GTTTGGTGGC TATACCGCGT ATATCGAGGG CTGGGGTTTA TATAGCGAAT CTTTCCCGAA AGAAATGGGA CTCTACGCCG ATCCCTATTC TGACTTTGGT CGTCTAGCAA TGGAGCTATG GCGTGCATGT CGCTTAGTCG TTGATACTGG TATCCACGCT AAAAAGTGGA CCCGCGAGCA AGGCATTGCC TATTACGTGG ATAATACGCC CAATGCTAAA TCAGATGCGG TGAAAATGGT TGAACGCCAT ATCGTTATGC CATCGCAAGC GACAGCCTAT AAAGTGGGCA TGATTAAGCT GCTGGAACTC AGACATAAAG CAGAGCAACA GCTTGGCAGT CAATTTGATA TCCGCGACTT CCATACGCTA GTACTTGCTA ACGGCGCATT GCCGCTGGAT GTATTAGAAC AACAAGTCGA TCTCTGGATA GCCAGCAAGA AGAAGGCCTA A
|
Protein sequence | MPIKTKISLV ALTLSALLTI PAYAASSSPA LHSASEPMNA VVQTESDKAN ALFETIFMEN IMASPISQTY MGIKQDYDKW DELGDAADDK ALARTKKQLA QVNLIDAAKL DPQTNLSLTL LKQNLQNDIE DDQWRYHNYP VNQMYGGHSM IASFLINQHQ ITDVSDAKAY ISRLNGVPKR LSQLQTVLDV RADKGIIAPK FVFAYVISDS QNIIKGAPFD KGDDSALLAD FRRKVNALAI KETEKQALLK QAEHALVTQV EPAYNKLISY IKTLATRADD RDGAWKLPNG AAFYNNALAR TTTTNMTADQ IHDLGLSEVE RIHNEMRAIM KKVNFKGDLQ QFFSFMRDDP QFYYPNTAEG KAAYLAEATK LIDNMKSRLD EVFKVKPKAA MIVKQVEAFR EKSAGKAFYE QPAPDGSRPG SYYANLYDMK AMPKYQMEAL AYHEGIPGHH MQIAISQELQ NIPKFRKFGG YTAYIEGWGL YSESFPKEMG LYADPYSDFG RLAMELWRAC RLVVDTGIHA KKWTREQGIA YYVDNTPNAK SDAVKMVERH IVMPSQATAY KVGMIKLLEL RHKAEQQLGS QFDIRDFHTL VLANGALPLD VLEQQVDLWI ASKKKA
|
| |