Gene Sbal195_2665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_2665 
Symbol 
ID5754425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp3162433 
End bp3163515 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content47% 
IMG OID641288960 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001555093 
Protein GI160875777 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000267288 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TTATTCTAAT AATCGCCCTA TTGGCCGCGG CATGGTTTGG ATATCAAGCC 
ATGCAACCGC AAGAGATTGC CACTGCGCAA ATGAAACTCA TGCCTAACGT GGTGATTGCC
ACCGCCGCCA TGGAACCTAT TCGCGATGAA GTGGAAGCCA TCGGCACCAA TAAAGCCGCA
GAATCTGTGA CTATAACCCC TAAAGTTACC GACATGGTGA TAGCACTTAA GTTTGATGAT
GGCGACATAG TCAAAAAGGG TGACTTGCTA GTCCAACTGC AAAATGCTGA GCAAATCGCT
AAGGTTAAAG CCGCACAAGT TAAAGTCAGT GATAATCAAC GTGAATTCAA CCGTATCAGT
TCGTTAGTCA CCAGCCGCAC TGTGGCAGAG TTAGAACGCG ACAGATTACA AACCCTTATC
GATACCACCC GCGCAGAGCT TGAACAGGCG CAAGCATCAC TCAATGATCG CAGTATTCTG
GCGCCTTTTA ATGGCCGTTT AGGTTTACGC CAAATCAGTG TCGGTAGCCT AGTATCGCCC
GGCACTGCGA TCACTACCTT GGATGATATC TCTAAGATTA AACTCGATTT TTCAGTGCCT
GAGCGTTTTA TTCAAGATTT AGCCCCAGGT AAGAAAGTTG AAGCTAAAGC CGTGGCCTTT
CCTGATTTTA CCTTCAAAGG CGTGGTGACA TCGATTGATA GCCGCGTAAA CCCAACGACG
CGCACTGTGA TTGTCCGCGC TGAAATTCCC AATCCTGAGC TTCGTTTATT ACCGGGCATG
TTGATGAAGG TCAAACTCAT CAAACGTAGC CGCGAAGCCT TGATGTTGCC AGAATCTGCC
ATTATCCCAA TCCAAAATGA TCACTTTGTT TACAGCGTTA ATGCCGACAA TGTGATTGAG
CGTAAACAAG TCACTATTGG GATTCGTACC CGTGGTTGGG TGGAAATTCT AGACGGTTTA
GCCTTGGGCG AAAACGTGGT GATCCGTGGC TTATTGAAAG TCCACCCTGG CGATAAAGTG
CAAACGGAGT TCGCGGAAAA GTTTAGTTAT CTTGCTGATA CGAGCGCGGA GCCAAGTGTA
TGA
 
Protein sequence
MKKIILIIAL LAAAWFGYQA MQPQEIATAQ MKLMPNVVIA TAAMEPIRDE VEAIGTNKAA 
ESVTITPKVT DMVIALKFDD GDIVKKGDLL VQLQNAEQIA KVKAAQVKVS DNQREFNRIS
SLVTSRTVAE LERDRLQTLI DTTRAELEQA QASLNDRSIL APFNGRLGLR QISVGSLVSP
GTAITTLDDI SKIKLDFSVP ERFIQDLAPG KKVEAKAVAF PDFTFKGVVT SIDSRVNPTT
RTVIVRAEIP NPELRLLPGM LMKVKLIKRS REALMLPESA IIPIQNDHFV YSVNADNVIE
RKQVTIGIRT RGWVEILDGL ALGENVVIRG LLKVHPGDKV QTEFAEKFSY LADTSAEPSV