Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2665 |
Symbol | |
ID | 5754425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3162433 |
End bp | 3163515 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641288960 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001555093 |
Protein GI | 160875777 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000267288 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TTATTCTAAT AATCGCCCTA TTGGCCGCGG CATGGTTTGG ATATCAAGCC ATGCAACCGC AAGAGATTGC CACTGCGCAA ATGAAACTCA TGCCTAACGT GGTGATTGCC ACCGCCGCCA TGGAACCTAT TCGCGATGAA GTGGAAGCCA TCGGCACCAA TAAAGCCGCA GAATCTGTGA CTATAACCCC TAAAGTTACC GACATGGTGA TAGCACTTAA GTTTGATGAT GGCGACATAG TCAAAAAGGG TGACTTGCTA GTCCAACTGC AAAATGCTGA GCAAATCGCT AAGGTTAAAG CCGCACAAGT TAAAGTCAGT GATAATCAAC GTGAATTCAA CCGTATCAGT TCGTTAGTCA CCAGCCGCAC TGTGGCAGAG TTAGAACGCG ACAGATTACA AACCCTTATC GATACCACCC GCGCAGAGCT TGAACAGGCG CAAGCATCAC TCAATGATCG CAGTATTCTG GCGCCTTTTA ATGGCCGTTT AGGTTTACGC CAAATCAGTG TCGGTAGCCT AGTATCGCCC GGCACTGCGA TCACTACCTT GGATGATATC TCTAAGATTA AACTCGATTT TTCAGTGCCT GAGCGTTTTA TTCAAGATTT AGCCCCAGGT AAGAAAGTTG AAGCTAAAGC CGTGGCCTTT CCTGATTTTA CCTTCAAAGG CGTGGTGACA TCGATTGATA GCCGCGTAAA CCCAACGACG CGCACTGTGA TTGTCCGCGC TGAAATTCCC AATCCTGAGC TTCGTTTATT ACCGGGCATG TTGATGAAGG TCAAACTCAT CAAACGTAGC CGCGAAGCCT TGATGTTGCC AGAATCTGCC ATTATCCCAA TCCAAAATGA TCACTTTGTT TACAGCGTTA ATGCCGACAA TGTGATTGAG CGTAAACAAG TCACTATTGG GATTCGTACC CGTGGTTGGG TGGAAATTCT AGACGGTTTA GCCTTGGGCG AAAACGTGGT GATCCGTGGC TTATTGAAAG TCCACCCTGG CGATAAAGTG CAAACGGAGT TCGCGGAAAA GTTTAGTTAT CTTGCTGATA CGAGCGCGGA GCCAAGTGTA TGA
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Protein sequence | MKKIILIIAL LAAAWFGYQA MQPQEIATAQ MKLMPNVVIA TAAMEPIRDE VEAIGTNKAA ESVTITPKVT DMVIALKFDD GDIVKKGDLL VQLQNAEQIA KVKAAQVKVS DNQREFNRIS SLVTSRTVAE LERDRLQTLI DTTRAELEQA QASLNDRSIL APFNGRLGLR QISVGSLVSP GTAITTLDDI SKIKLDFSVP ERFIQDLAPG KKVEAKAVAF PDFTFKGVVT SIDSRVNPTT RTVIVRAEIP NPELRLLPGM LMKVKLIKRS REALMLPESA IIPIQNDHFV YSVNADNVIE RKQVTIGIRT RGWVEILDGL ALGENVVIRG LLKVHPGDKV QTEFAEKFSY LADTSAEPSV
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