Gene Sbal195_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0080 
Symbol 
ID5751776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp98517 
End bp100322 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content50% 
IMG OID641286325 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001552522 
Protein GI160873206 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTCG ATCAATATCA TGTTATTCGA CTATTACAGC AGCAGAGCGA GTCTTTAAAA 
GACGCGATAG CGCTGGAAGG TTTTGAAATG GCCGCTCCTT GGTATCAGGT GAGCTGGCAA
GCCTTTGACC AAATTAGCAG TAAAATTGCA CAAGTGTTGA TCGAACTTGG CGTACAAGTG
CAAGACCGTT GCGTTATTTT GGCGCAAAAC TGCCCACAGT GGACCTGTGC CGATGTCGGT
ACGCTTAAAA GTCGCGCCGT TGTGGTGCCG ATTTACCCCA CCAGTACCGT CGAGCAGGCG
AGCTTTATCG TTAACGATGC GGCGGCGAAA GTCATTTTTG TCGACGATGC TAAACAATAC
GCTATGGCCT GCGAGCTTCA AACCTTATGC CCAAGTCTTG AGCATGTGAT TGTTTTTGAT
GCCAGCGTGG CACTTGCCGC TGACAAAGCT GAGCAGCATT GGCATTTAGA TGCGCTGCTA
GCGGGCGATG CTAAAGCGAT TAAGCAAGAA GTTGAGCTTA ACCAGCGTTT ACAGGCGGCT
AATCTCGATG ATTTACTGAC CCTTATTTAT ACCTCTGGCA CCACGGGCGA TCCTAAAGGC
GTGATGCTGG ATTACCGCAA TATGGCCTCG ACCATACGTC AACACGATCA AAAACTGGCT
TTCCATTCTG GCGATGTGTC TTTGGCATTC TTGCCTTTGA GTCATGTATT TGAGCGCAGT
TGGAGTTTTT ACGTTTTGTG CCGTGGCGGT CATAACGTCT ATTTGCAAAA TACCCAAAGA
GTGAAAGAGG CGATTAGCGC CGTGCGTCCG CACACCTTGT GTGTGGTGCC GCGTTTCCTC
GAAAAAGTGT ACAGCGCCGT ACAAGATAAA GTCGCCAAAT CTGCCGACGG TCGTAAGAAG
TTGTTTGCTT GGGCTATGCG CGTTGGCGGG CGTCAGTTCG AAGTCGGCCA AGGTCGTGCT
AAGGGCGGAT TATGGTTGTC GCTGCAATGG CGTTTGGCCC ACAAACTTGT GTATAGCAAG
CTGCAAGCCG TGCTTGGCGG GCGTTTGAAG TTTATGCCCT GCGGTGGCGC GGCGTTAGAT
GTGAATGTCG GTAGCTTCTT CCATGCGATT AATATTCCTG TGCTGTGTGG TTACGGCATG
ACGGAAACCA ACGCGACCGT GACTTGCAAT ACCTTAGGTA ATCGAGTGCC AGGTTCTAAT
GGTCAACCTC TGCTGGAAAC CGAAATCAAG CTAGGCAAGG ACGATGAGAT TTTAGTCCGC
GGCGCGACTG TGATGCGTGG CTATTACAAT CGACCAGAAG ATACCGCCGC CGCCTTCGAA
GACGGTTGGT TAAAAACCGG CGATGCGGGA CGTTTTGATG CGAACGGTAA CTTATTTATT
ACCGACCGTA TCAAAGAGTT AATGAAAACC TCTAACGGAA AATATATTGC GCCGCAACGG
GTTGAGGGTG CTGTGGGCTG TTGTCCTTTT ATCGAGCAAG TGGCGATTAT TGCCGATGCG
CGTAACTATG TGACCGCCTT GATTGTGCCA GCGTTTGAGT CACTGGAAGC GTGGGCGAAG
GACAAAGGGC TGAAGTATGA GTCGCCTTTA GAATTGCTGC GCCATAGCCA TGTGGTTGAA
CATTTTGAGC AGCGCTTAAA GCAGTTGCAG CATGAGCTGG CGGGATTTGA ACAGATTAAA
AAGTTCACCC TCTTGCCTGA AGCTTTCTCG ATGGAAGCGG GGTTAATCAC CCCAACGCTC
AAGTTGCGCC GCAAAATGAT TTACCATAAA TACGCCCACG AAATTAATGC TATGTACAAC
AACTGA
 
Protein sequence
MSLDQYHVIR LLQQQSESLK DAIALEGFEM AAPWYQVSWQ AFDQISSKIA QVLIELGVQV 
QDRCVILAQN CPQWTCADVG TLKSRAVVVP IYPTSTVEQA SFIVNDAAAK VIFVDDAKQY
AMACELQTLC PSLEHVIVFD ASVALAADKA EQHWHLDALL AGDAKAIKQE VELNQRLQAA
NLDDLLTLIY TSGTTGDPKG VMLDYRNMAS TIRQHDQKLA FHSGDVSLAF LPLSHVFERS
WSFYVLCRGG HNVYLQNTQR VKEAISAVRP HTLCVVPRFL EKVYSAVQDK VAKSADGRKK
LFAWAMRVGG RQFEVGQGRA KGGLWLSLQW RLAHKLVYSK LQAVLGGRLK FMPCGGAALD
VNVGSFFHAI NIPVLCGYGM TETNATVTCN TLGNRVPGSN GQPLLETEIK LGKDDEILVR
GATVMRGYYN RPEDTAAAFE DGWLKTGDAG RFDANGNLFI TDRIKELMKT SNGKYIAPQR
VEGAVGCCPF IEQVAIIADA RNYVTALIVP AFESLEAWAK DKGLKYESPL ELLRHSHVVE
HFEQRLKQLQ HELAGFEQIK KFTLLPEAFS MEAGLITPTL KLRRKMIYHK YAHEINAMYN
N