| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0032 |
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| Symbol | |
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| ID | 5751724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 36841 |
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| End bp | 37971 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641286273 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001552474 |
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| Protein GI | 160873158 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00105156 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAATAC CCATGAAACG GTTAATTTTA CTCGCGTTAA TGACATTCAA TTGCACGTTT
GTTGCCGCCG ATACCCTTAC GCTGAAAGCG GGGCATCCTG AGTCATATGT GGTGAAAAAG
GGCGATACTC TTTGGGATAT CTCCGCAGCG TTTCTAAATG ATCCATGGAA ATGGCCACGT
CTTTGGGATG TAAACCCACA GATTGCCAAT CCCCATCTTA TTTATCCTGG CGATCAACTC
ACGCTCGTGT TTGTCGATGG TCAGCCTCGG CTTGTGCGCA ACGGCGATAT GGTCGACAGT
GCTAAACCCC ATGTGAAGAA GAGTCCTGAA GGACGGATTA TTGCCAAGAG CAATGCCATT
CCTGCCGTCG ACTTGGCTTT GATTGAACAG TATTTAGTGC AGAATCGCGT TGTCGCAACC
GACTGGCTTG CCGAGCAACC TATGGTATTG GCAGGCGAAA GCCCATCGCG TCACCATATT
GTGGGTGATG TGATTTATAT CGATGCTGAA CTGCCGATGA ATCAAAAGTA CGGTGTTTAC
GAACGTGGTC GCGAGTTTTT CAATAAAGCG TCTGGCGAAG CGATAGGACA AGAAGCCATT
TTAGCATCAA CTGGGCAAGT GGTGGAGTCT GGTAAGGTTT CAAAAATTAA GTTGTTAACC
AGCTTTCGTG AAACTAAAGC GGGTTTCAGA GTCATGCCGA TGGAAAGTGA TTCCTTGATG
TCAGCTTACT TTACGCCAAA ACCGGCAGAG TTAAAGACGC CAGCCGTCGT GCTTGCTATC
GAATCAAAGA TGCGTGAAGC GGGTAAGTTA GATGTGGTGT ACTTAGATAA AGGCACCCAA
GATGGGGTTG AGCCCGGAGT CGTGTTTTCT ATTTACCGTG ATGGTGAAGT CATCGTCATC
AACAATGATG GTATGCCAGT GCCTGCCACT GAGCGCACCG CCTACGATAA CCTGATGGCA
TCTGTCTCAT CGGATCGCGC TATTCAAATG CCAGATATCT ATCATGGTAA ATTGTTGGTT
TTCAAAGTAT TCGACAAAGC GAGCTTGGGT TTGATTGTCT CCACCGAGCG GCCTGTGCGT
GTCGACGATA AGTTAATTGC CCCTGAGTCT TTAGCCTTAA GAGGTCAGTA A
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| Protein sequence | MEIPMKRLIL LALMTFNCTF VAADTLTLKA GHPESYVVKK GDTLWDISAA FLNDPWKWPR
LWDVNPQIAN PHLIYPGDQL TLVFVDGQPR LVRNGDMVDS AKPHVKKSPE GRIIAKSNAI
PAVDLALIEQ YLVQNRVVAT DWLAEQPMVL AGESPSRHHI VGDVIYIDAE LPMNQKYGVY
ERGREFFNKA SGEAIGQEAI LASTGQVVES GKVSKIKLLT SFRETKAGFR VMPMESDSLM
SAYFTPKPAE LKTPAVVLAI ESKMREAGKL DVVYLDKGTQ DGVEPGVVFS IYRDGEVIVI
NNDGMPVPAT ERTAYDNLMA SVSSDRAIQM PDIYHGKLLV FKVFDKASLG LIVSTERPVR
VDDKLIAPES LALRGQ
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