Gene Sbal195_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0024 
Symbol 
ID5751716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp29343 
End bp29867 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content44% 
IMG OID641286265 
Productprotoporphyrinogen oxidase 
Protein accessionYP_001552466 
Protein GI160873150 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG4635] Flavodoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0780321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0115046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACGT TAATAATCTA TTCGACGATT GATGGCCAAA CATTGGCAAT TTGCCAAAAA 
ATGAAGACGA TTGCAGAGCA GGCGGGAGAG CAGGTTTCGC TGGTCACATT AGAGCAGGCT
GATGCGTTGA GCTTAGCTGA TTTTGATAAA GTGCTGATCG GCGCCAGTAT TCGTTATGGT
AAGCATAGAC CTGAACTTTA CCAGTTTGTG AACCGCCACC ATGCGGTGCT CGATACTAAG
ATTAATGGCT TTTTTACCGT TAATGTCGTG GCGCGCAAAC CCTTAAAGAA TACGCCTGAA
ACCAATCCTT ATATGCAAAA GTTCCTGCAA TTATCACTAT GGCAGCCACA GTTGCTTGAA
GTGTTTGCTG GCAAAATTGA TTATCCTAAA TACGGTTTCT TCGATCGCAC TATGATACGT
TTCATTATGT GGATGACTAA AGGGCCAACC GATATCACAG GCACCTTTGA GTTTACCGAT
TGGGAAAAAG TCGACGCCTT CGGTAACCGC TTTAGCCAGC ACTAA
 
Protein sequence
MQTLIIYSTI DGQTLAICQK MKTIAEQAGE QVSLVTLEQA DALSLADFDK VLIGASIRYG 
KHRPELYQFV NRHHAVLDTK INGFFTVNVV ARKPLKNTPE TNPYMQKFLQ LSLWQPQLLE
VFAGKIDYPK YGFFDRTMIR FIMWMTKGPT DITGTFEFTD WEKVDAFGNR FSQH