Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0024 |
Symbol | |
ID | 5751716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 29343 |
End bp | 29867 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641286265 |
Product | protoporphyrinogen oxidase |
Protein accession | YP_001552466 |
Protein GI | 160873150 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG4635] Flavodoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0780321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0115046 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACGT TAATAATCTA TTCGACGATT GATGGCCAAA CATTGGCAAT TTGCCAAAAA ATGAAGACGA TTGCAGAGCA GGCGGGAGAG CAGGTTTCGC TGGTCACATT AGAGCAGGCT GATGCGTTGA GCTTAGCTGA TTTTGATAAA GTGCTGATCG GCGCCAGTAT TCGTTATGGT AAGCATAGAC CTGAACTTTA CCAGTTTGTG AACCGCCACC ATGCGGTGCT CGATACTAAG ATTAATGGCT TTTTTACCGT TAATGTCGTG GCGCGCAAAC CCTTAAAGAA TACGCCTGAA ACCAATCCTT ATATGCAAAA GTTCCTGCAA TTATCACTAT GGCAGCCACA GTTGCTTGAA GTGTTTGCTG GCAAAATTGA TTATCCTAAA TACGGTTTCT TCGATCGCAC TATGATACGT TTCATTATGT GGATGACTAA AGGGCCAACC GATATCACAG GCACCTTTGA GTTTACCGAT TGGGAAAAAG TCGACGCCTT CGGTAACCGC TTTAGCCAGC ACTAA
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Protein sequence | MQTLIIYSTI DGQTLAICQK MKTIAEQAGE QVSLVTLEQA DALSLADFDK VLIGASIRYG KHRPELYQFV NRHHAVLDTK INGFFTVNVV ARKPLKNTPE TNPYMQKFLQ LSLWQPQLLE VFAGKIDYPK YGFFDRTMIR FIMWMTKGPT DITGTFEFTD WEKVDAFGNR FSQH
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