Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0020 |
Symbol | fadB |
ID | 5751712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 23200 |
End bp | 25350 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641286261 |
Product | multifunctional fatty acid oxidation complex subunit alpha |
Protein accession | YP_001552462 |
Protein GI | 160873146 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0214886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0135519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTACC AAAGTCCTAC AATTCAGGTT GAGTTACTCG AGGATAATAT TGCCAAGCTG TGCTTTAACG CACCCGGTTC GGTGAACAAA TTCGACAGAG AAACCCTCGC CTCGCTCGAT GCGGCATTAG ACAGCATCAA GCAAGATTCC AATATCAAAG CGTTAGTGCT GACCTCAAGT AAAGATACCT TTATTGTGGG CGCAGACATT ACCGAATTTT TAGGCCTGTT CGCACAAGAT GACGCCGTAT TGCTCTCTTG GGTTGAACAA GCCAACGCAG TCTTCAACAA ACTCGAAGAC TTGCCTTTCC CAACTGCATC AGCAATCAAA GGCTTTGCCT TAGGTGGCGG CTGTGAAACC ATTCTGGCAA CCGATTTCCG TGTCGCAGAC ACCACAGCCA AAATCGGTTT ACCTGAAACT AAACTCGGCA TCATCCCAGG TTTTGGCGGC ACAGTTCGTC TGCCACGTGT GATTGGTGCA GATAACGCAC TTGAGTGGAT CACCACAGGT AAAGACCAAC GCGCTGAAGA TGCACTGAAA GTCGGCGCTG TTGATGCCGT GGTTGCACCA CAAGCGTTAG AAGCTGCTGC GATTCAAATG CTCAAAGATG CTGTTGCTGA AAAGCTGGAT TGGCAAGCAC GTCGTAACCG TAAACTGTCT GCACTAACAC TGCCAAAACT TGAAGCTATG ATGTCATTCA CCACAGCCAA AGGCATGGTG TTTGCGGTTG CGGGTAAACA CTACCCTGCA CCAATGGCTG CTGTAAGCGT GATTGAGCAA GCATCGACTA AAGGTCGTGC TGAAGCATTA CAAATCGAAC ATCAAGCCTT TATCAAGCTC GCTAAAACTG ACGTTGCTAA GGCACTTATC GGTATTTTCC TTAACGATCA ATTCGTTAAA GGTAAAGCGA AGAAAGCCGG CAAGTTAGCG AAAGAAGTCA ACAACGCGGC CGTATTAGGC GCAGGCATTA TGGGCGGCGG TATCGCTTAC CAAAGCGCCA GTAAAGGCAC ACCGATTGTC ATGAAAGACA TTGCCCAGCC AGCATTAGAT TTAGGCCTCA ATGAAGCCGC TAAACTGCTG TCTGCCCAAG TCGCCCGTGG CCGTTCAACG CCAGAAAAAA TGGCCAAAGT GCTGAACAAT ATCACTCCTT CGTTAGATTA TGCCGCGATT AAACACAGTG ATGTTGTCGT TGAAGCCGTT GTTGAACATC CAAAAATCAA AGCACAGGTT TTAGCCGAAG TTGAAGGCTA TGTGAGTGAA GATGCAATTA TCGCCTCAAA CACTTCAACC ATTTCAATCA ACTTGCTCGC TAAGAGCATG AAGAAGCCAG AGCGTTTCTG CGGTATGCAT TTCTTTAACC CAGTGCACAA AATGCCGTTG GTCGAAGTTA TCCGTGGCGA GCACAGCTCT GAAGAAACCA TCGCCTCTGT TGTGGCTTAT GCCAGCAAAA TGGGCAAGAC CCCAATCGTT GTTAATGATT GCCCAGGCTT CTTCGTTAAC CGCGTACTCT TCCCTTACTT TGCAGGCTTT AACGGCTTAC TTGCCGAAGG TGGCGACTTT GCTGCAATCG ACAAAGTGAT GGAAAAACAA TTCGGTTGGC CAATGGGTCC AGCTTACCTG CTCGACGTAG TCGGTTTAGA CACAGGTCAT CACGCCCAAG CCGTTATGGC TGAAGGTTTC CCTGATCGCA TGGGTAAATC AGGTACTGAC GCGATTGATG TGATGTTTGA GAACAAACGT CTTGGCCAGA AAAATGGCAA AGGTTTCTAT GTCTATTCAG TCGATAGCCG TGGCAAGCCG AAGAAAGATG TCGATCCAAC AAGCTACGGT CTATTGAAAG ATGCCTTTGG CGAGTTAAAA GCCTTTGAAG CCGATGACAT TATTGCCCGT ACTATGATCC CTATGATCAT CGAAACCGTG CGCTGTTTAG AAGAAGGTAT TGTCGCATCG CCTGCCGAAG CGGATATGGG CCTAGTTTAT GGCTTAGGTT TCCCGCCATT CAGAGGCGGC GTATTCCGTT ACTTGGATAC CATGGGTGTC GCAAATTTTG TAGCCTTAGC AGACAAATAC GCTCACTTGG GCGGTCTGTA TCAAGTCACA GATGCGATGC GCACATTAGC AGCCAATAAC GGTAGCTACT ACCAAGCCTA A
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Protein sequence | MIYQSPTIQV ELLEDNIAKL CFNAPGSVNK FDRETLASLD AALDSIKQDS NIKALVLTSS KDTFIVGADI TEFLGLFAQD DAVLLSWVEQ ANAVFNKLED LPFPTASAIK GFALGGGCET ILATDFRVAD TTAKIGLPET KLGIIPGFGG TVRLPRVIGA DNALEWITTG KDQRAEDALK VGAVDAVVAP QALEAAAIQM LKDAVAEKLD WQARRNRKLS ALTLPKLEAM MSFTTAKGMV FAVAGKHYPA PMAAVSVIEQ ASTKGRAEAL QIEHQAFIKL AKTDVAKALI GIFLNDQFVK GKAKKAGKLA KEVNNAAVLG AGIMGGGIAY QSASKGTPIV MKDIAQPALD LGLNEAAKLL SAQVARGRST PEKMAKVLNN ITPSLDYAAI KHSDVVVEAV VEHPKIKAQV LAEVEGYVSE DAIIASNTST ISINLLAKSM KKPERFCGMH FFNPVHKMPL VEVIRGEHSS EETIASVVAY ASKMGKTPIV VNDCPGFFVN RVLFPYFAGF NGLLAEGGDF AAIDKVMEKQ FGWPMGPAYL LDVVGLDTGH HAQAVMAEGF PDRMGKSGTD AIDVMFENKR LGQKNGKGFY VYSVDSRGKP KKDVDPTSYG LLKDAFGELK AFEADDIIAR TMIPMIIETV RCLEEGIVAS PAEADMGLVY GLGFPPFRGG VFRYLDTMGV ANFVALADKY AHLGGLYQVT DAMRTLAANN GSYYQA
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