Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3667 |
Symbol | |
ID | 6269823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3410396 |
End bp | 3411013 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641727531 |
Product | putative ribosome maturation factor |
Protein accession | YP_001881966 |
Protein GI | 187733572 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0000309494 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCAGTAA ACAATGTGGA AAGCCGGTTT CGGCGGAATA ATAACGTGAA TAATAACCTG CAAGGAGACG CTATCGCAGC TGCGATAGAT GTCCTCAATG AAGAACGTGT CATCGCCTAT CCAACGGAAG CCGTTTTCGG TGTTGGGTGC GATCCTGATA GCGAAACAGC AGTGATGAGA CTGTTGGAGT TAAAACAGCG TCCGGTTGAT AAGGGGCTGA TTTTAATCGC GGCAAATTAC GAGCAGCTTA AACCCTATAT TGATGACACC ATGCTGACTG ATGCGCAGCG TGAAACCATT TTTTCCCGCT GGCCAGGTCC TGTCACCTTT GTCTTTCCCG CGCCTGCGAC AACACCGCGC TGGTTGACGG GCCGCTTTGA TTCGCTTGCT GTACGAGTCA CCGACCATCC GTTGGTGGTT GCTTTGTGCC AGGCTTATGG TAAACCGCTG GTTTCTACCA GTGCCAACTT GAGTGGATTG CCACCTTGTC GAACAGTAGA CGAAGTTCGC GCACAATTTG GCGCGGCGTT CCCGGTTGTG CCTGGTGAAA CGGGGGGGCG TTTAAATCCT TCAGAAATCC GCGATGCCCT GACGGGTGAA CTGTTTCGAC AGGGGTAA
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Protein sequence | MPVNNVESRF RRNNNVNNNL QGDAIAAAID VLNEERVIAY PTEAVFGVGC DPDSETAVMR LLELKQRPVD KGLILIAANY EQLKPYIDDT MLTDAQRETI FSRWPGPVTF VFPAPATTPR WLTGRFDSLA VRVTDHPLVV ALCQAYGKPL VSTSANLSGL PPCRTVDEVR AQFGAAFPVV PGETGGRLNP SEIRDALTGE LFRQG
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