Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1882 |
Symbol | sufD |
ID | 6268425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1723493 |
End bp | 1724764 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641725945 |
Product | cysteine desulfurase activator complex subunit SufD |
Protein accession | YP_001880441 |
Protein GI | 187730455 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.077757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGCT TACCGAACAG CAGTAACGCG CTGCAACAGT GGCATCACTT GTTTGAAGCT GAAGGGACAA AACGCTCCCC GCAAGCACAG CAGCATTTAC AACAATTGCT GCGTACCGGA CTGCCGACAC GTAAACATGA AAACTGGAAA TATACGCCGC TGGAAGGGCT GACCAATAGC CAGTTTGTCA GCATTGCGGG GGAGATATCC CCACAGCAGC GTGATGCCTT AGCGTTAACG TTAGACGCCG TGCGGCTGGT GTTTGTCGAT GGACGTTACG TGCCCGCGCT GAGCGATGCA ATTGAAGGCA GCGGATATGA AGTGAGCATT AACGACGACC GTCAGGGGTT ACCCGACGCT ATTCAGGCGG AAGTGTTTCT GCATTTGACG GAAAGCCTGG CACAAAGCGT GACGCATATC GCCGTGAAGC GCGGTCAACG GCCGGCAAAG CCATTGCTGT TAATGTATAT CACCCAGGGC GTGGCAGGTG AAGAGGTGAA CACTGCCCAT TACCGGCATC ATCTGGATCT GGCGGAAGGT GCCGAAGCAA CGGTGATCGA ACATTTTGTC AGCCTTAATG ATGCTCGTCA TTTTACCGGG GCACGGTTCA CTATCAATGT CGCAGCGAAC GCCCACTTGC AGCATATCAA GCTGGCGTTT GAAAACCCGC TCAGTCACCA CTTTGCTCAT AACGATTTGT TGCTGGCTGA GGATGCCACC GCATTTAGCC ATAGTTTCCT GCTGGGTGGC GCAGTGTTAC GACACAACAC CAGTACGCAA CTCAATGGCG AAAACAGCAC GCTGCGGATC AATAGCCTGG CGATGCCGGT GAAAAACGAG GTGTGTGATA CCCGTACCTG GCTGGAACAC AATAAAGGTT TTTGTAACAG CCGACAGTTG CACAAAACTA TCGTCAGCGA CAAAGGCCGC GCGGTATTTA ACGGTTTGAT CAACGTCGCG CAGCACGCCA TCAAAACGGA TGGTCAGATG ACCAACAATA ATCTGCTGAT GGGCAAACTG GCGGAAGTGG ATACGAAACC GCTGCTGGAA ATCTATGCAG ATGATGTGAA ATGCAGCCAC GGCGCGACGG TGGGGCGTAT TGATGATGAA CAGATGTTCT ATCTGCGCTC GCGCGGGATC AATCAGCAGG ATGCCCAGCA GATGATCATT TACGCCTTTG CTGCCGAACT GACGGAAGCA CTGCGTGATG AGGGGCTTAA ACAGCAGGTG CTGGCCCGAA TCGGTCAACG GCTGCCAGGA GGTGCAAGAT GA
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Protein sequence | MAGLPNSSNA LQQWHHLFEA EGTKRSPQAQ QHLQQLLRTG LPTRKHENWK YTPLEGLTNS QFVSIAGEIS PQQRDALALT LDAVRLVFVD GRYVPALSDA IEGSGYEVSI NDDRQGLPDA IQAEVFLHLT ESLAQSVTHI AVKRGQRPAK PLLLMYITQG VAGEEVNTAH YRHHLDLAEG AEATVIEHFV SLNDARHFTG ARFTINVAAN AHLQHIKLAF ENPLSHHFAH NDLLLAEDAT AFSHSFLLGG AVLRHNTSTQ LNGENSTLRI NSLAMPVKNE VCDTRTWLEH NKGFCNSRQL HKTIVSDKGR AVFNGLINVA QHAIKTDGQM TNNNLLMGKL AEVDTKPLLE IYADDVKCSH GATVGRIDDE QMFYLRSRGI NQQDAQQMII YAFAAELTEA LRDEGLKQQV LARIGQRLPG GAR
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