Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0050 |
Symbol | |
ID | 6270386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 50837 |
End bp | 51496 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641724309 |
Product | 23S rRNA/tRNA pseudouridine synthase A |
Protein accession | YP_001878869 |
Protein GI | 187731746 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000000437271 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGATGG AAAACTACAA TCCACCGCAG GAACCCTGGT TGGTTATCCT GTATCAGGAT GACCACATTA TGGTGGTTAA CAAGCCGAGC GGTTTGTTGT CTGTGCCGGG GCGTCTGGAA GAGCACAAAG ACAGCGTGAT GACGCGCATT CAGCGTGATT ATCCGCAGGC AGAATCGGTG CATCGTCTGG ATATGGCTAC CAGCGGCGTG ATTGTAGTGG CGCTGACCAA AGCCGCGGAG CGGGAGTTAA AACGCCAGTT CCGCGAGCGC GAGCCGAAAA AGCAGTATGT GGCCCGCGTC TGGGGGCATC CATTCCCTGC GGAAGGTCTG GTGGATCTGC CGCTGATTTG CGACTGGCCA AACCGCCCGA AACAGAAAGT CTGTTACGAA ACGGGTAAAC CTGCGCAGAC GGAATATGAA GTGGTGGAGT ATGCGGCGGA TAACACGGCA AGAGTGGTGT TAAAACCGAT TACTGGGCGT TCGCATCAAT TGCGTGTGCA TATGCTGGCG CTGGGGCATC CGATTCTCGG CGATCGTTTT TATGCATCAC CAGAAGCGAG AGCGATGGCA CCGCGTTTGT TGCTACATGC AGAGATGTTG ACGATTACCC ATCCGGCGTA TGGCAATAGT ATGACGTTTA AAGCGCCAGC GGATTTTTAA
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Protein sequence | MGMENYNPPQ EPWLVILYQD DHIMVVNKPS GLLSVPGRLE EHKDSVMTRI QRDYPQAESV HRLDMATSGV IVVALTKAAE RELKRQFRER EPKKQYVARV WGHPFPAEGL VDLPLICDWP NRPKQKVCYE TGKPAQTEYE VVEYAADNTA RVVLKPITGR SHQLRVHMLA LGHPILGDRF YASPEARAMA PRLLLHAEML TITHPAYGNS MTFKAPADF
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