Gene SbBS512_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_0005 
Symbol 
ID6268364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010657 
Strand
Start bp3112 
End bp3576 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content45% 
IMG OID641724213 
ProductDNA-binding protein H-NS family 
Protein accessionYP_001878773 
Protein GI187729974 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones93 
Plasmid unclonability p-value0.0000000922105 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC TGACTAAAGA AGATGAATAC GGCATTATCA GCCGTACTAT GATGAATATT 
CGTTCATTGC GTGTTTTTGC CCGTGAAGTT GATTTTGAGC AATTGCTCGA AATGCAGGAT
AAACTGAACG TTGTTGTTGA AGAACGTCGT GAAGAGGCTG AACGTGAAGC GGTTGAACGC
CAGGAACTTG AAGCCAAACG TCAGCAGGCC ATTGAATACA TCATATCTTT AGGTCTTGAT
CCCGAATCAC TCCTTGCTCC TGTAACAGCA GATACAGTAA AAACCAGGCG GAAAGCCAAA
GGCGGAGTAA GAAAGGCTAA ATACCGCTTT AAGGATGAAA ATGGCGAGAT CAGAGAATGG
TCTGGTAATG GCAAGCGTCC GCTTGCTTTA CAGAAGCTGC TTGATGAGGG CCATTTCATG
GAAGATTTCC TCATTGACAA ACTGCAACCT GGGCAGGTTG AATAA
 
Protein sequence
MSELTKEDEY GIISRTMMNI RSLRVFAREV DFEQLLEMQD KLNVVVEERR EEAEREAVER 
QELEAKRQQA IEYIISLGLD PESLLAPVTA DTVKTRRKAK GGVRKAKYRF KDENGEIREW
SGNGKRPLAL QKLLDEGHFM EDFLIDKLQP GQVE