Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_0005 |
Symbol | |
ID | 6268364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010657 |
Strand | + |
Start bp | 3112 |
End bp | 3576 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641724213 |
Product | DNA-binding protein H-NS family |
Protein accession | YP_001878773 |
Protein GI | 187729974 |
COG category | [R] General function prediction only |
COG ID | [COG2916] DNA-binding protein H-NS |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 93 |
Plasmid unclonability p-value | 0.0000000922105 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAC TGACTAAAGA AGATGAATAC GGCATTATCA GCCGTACTAT GATGAATATT CGTTCATTGC GTGTTTTTGC CCGTGAAGTT GATTTTGAGC AATTGCTCGA AATGCAGGAT AAACTGAACG TTGTTGTTGA AGAACGTCGT GAAGAGGCTG AACGTGAAGC GGTTGAACGC CAGGAACTTG AAGCCAAACG TCAGCAGGCC ATTGAATACA TCATATCTTT AGGTCTTGAT CCCGAATCAC TCCTTGCTCC TGTAACAGCA GATACAGTAA AAACCAGGCG GAAAGCCAAA GGCGGAGTAA GAAAGGCTAA ATACCGCTTT AAGGATGAAA ATGGCGAGAT CAGAGAATGG TCTGGTAATG GCAAGCGTCC GCTTGCTTTA CAGAAGCTGC TTGATGAGGG CCATTTCATG GAAGATTTCC TCATTGACAA ACTGCAACCT GGGCAGGTTG AATAA
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Protein sequence | MSELTKEDEY GIISRTMMNI RSLRVFAREV DFEQLLEMQD KLNVVVEERR EEAEREAVER QELEAKRQQA IEYIISLGLD PESLLAPVTA DTVKTRRKAK GGVRKAKYRF KDENGEIREW SGNGKRPLAL QKLLDEGHFM EDFLIDKLQP GQVE
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