Gene SaurJH1_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_1301 
Symbol 
ID5316673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand
Start bp1323685 
End bp1324992 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content33% 
IMG OID640779388 
Productsun protein 
Protein accessionYP_001316441 
Protein GI150393766 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases
[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAA ACGTGAGAAG TCTTGCTTTT GACACGATTC AAGATATATT AAATGAAGGT 
GCGTATAGTA ACTTGCGTAT CAATGAAGTG TTGTCAGAAA ATGAATTAAA TGCAATGGAT
AAGGCTTTAT TTACAGAAAT TGTCTACGGA ACCGTTAAAA GAAAATATAC GTTAGATTTT
TATTTAAAGC CTTTTGTGAA AACAAAGATT AAGGCATGGG TTAGGCAATT ATTATGGATG
AGTATTTATC AATATGTATA TTTAGATAAA GTTCCAAATC ATGCCATTAT TAATGAAGCA
GTTGAAATAG CAAAAGAACG CGGTGGCTAT CATAATGGTA ATGTCGTAAA TGGTATTTTA
CGTACAATGA TGCGTAGTGA CTTACCTGAT TTTAATGAAA TTGCAGATCC TAAAAAAAGA
ATGGCAATCG AGTATAGTAT GCCGAAGTGG ATTATAGATC ATTGGGCAAC ACATTATGGT
CTCGAAGAAA CTGAAACAAT TTTACAGTCA TTTTTAGAAA CGACATCAAC AACTGTGCGT
GCCAACCTGA CGCGAGCATC ATTAGATGAT ATTATTGAAA AGTTGCAAGA CGAAGGTTAT
GACGTTGAAA AAGATCATGA CTTACCTTAT TGTCTCCATA TAGGAGGACA ACCAATTATT
CATTCTCGTT CATTTAAAGA TGGATTCGTT TCAATTCAAG ATAAAAGCTC AATGTTTGTT
GCACACATTA TGAATGTAGA CCGACATGAT CACGTATTAG ATGCATGTAG TGCACCTGGC
GGTAAAGCTT GTCACATTGC TGAAGTTTTA ATGCCAGAAG GGCAAGTTGA CGCTTCAGAT
ATACATGATC ACAAAATAGA CTTAATTAAT TTTAATATAA AAAAATTACG ATTAACAAAT
ATTAAGGCTT TTCAACATGA TGCGACAAAA CCTTATGATA AAACATACGA TAAGATACTT
GTTGATGCAC CATGTAGCGG ATTAGGTGTA ATGAGACATA AGCCGGAGAT TAAGTATACT
CAAAGCAAAC AACATATTGA GTCACTAGTT GAATTACAGC TTGAAATATT GGAAAATGTA
AAAAACAATG TAAAAATAGG TGGCGAAATC ATCTATTCAA CATGTACAAT TGAGCAACTA
GAAAATGAAA ACGTGATTTA TACGTTTCTG AAAAATAATA AAAACTTCGA ATTTGAACCG
TTTCAACATC CGATAACTGG AGAGTTGGTC AAAACGTTAC AAATCATGCC GCAAGACTTT
AATTCAGATG GATTCTTTAT CACTAAGATA AAAAGAAAGG ACAATTAG
 
Protein sequence
MIENVRSLAF DTIQDILNEG AYSNLRINEV LSENELNAMD KALFTEIVYG TVKRKYTLDF 
YLKPFVKTKI KAWVRQLLWM SIYQYVYLDK VPNHAIINEA VEIAKERGGY HNGNVVNGIL
RTMMRSDLPD FNEIADPKKR MAIEYSMPKW IIDHWATHYG LEETETILQS FLETTSTTVR
ANLTRASLDD IIEKLQDEGY DVEKDHDLPY CLHIGGQPII HSRSFKDGFV SIQDKSSMFV
AHIMNVDRHD HVLDACSAPG GKACHIAEVL MPEGQVDASD IHDHKIDLIN FNIKKLRLTN
IKAFQHDATK PYDKTYDKIL VDAPCSGLGV MRHKPEIKYT QSKQHIESLV ELQLEILENV
KNNVKIGGEI IYSTCTIEQL ENENVIYTFL KNNKNFEFEP FQHPITGELV KTLQIMPQDF
NSDGFFITKI KRKDN