| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_0092 |
|---|
| Symbol | |
|---|
| ID | 5315742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | + |
|---|
| Start bp | 101784 |
|---|
| End bp | 104021 |
|---|
| Gene Length | 2238 bp |
|---|
| Protein Length | 745 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640778162 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001315241 |
|---|
| Protein GI | 150392566 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3664] Beta-xylosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGTG ATTATTTAAT TCGAGTAGAA ACTGAAAGCA TGCCAGATTT CAAAAGGCTC
AATGGTTTAA TGATTGGTTT TGTTATTAAA GGTGAGGCAC ATATTTATGA TGAAAATAAC
ATGACGCAAT GCAACAGTGG CGACATTTTC ATCATTAACC ACCGTGACTT GTATCGATTT
CAACTTCAAC AAGATGGCAT CATATGTTAT ATCCAATTCC AAATGAAATA TTTGGCAGAC
AAGTTTGATG ATGCGCATTG TCTATATTTT CACTTAACAG ATGCGACCAC AACCAAGAAT
ATACATCAAC TGAGAAATAT AATGGCAAGA CTGGTTTCAA CACACATTCG ACATAATGAG
TTGTCTAAAT TGACTGAGCA ACAACTTGTG ATTCAGTTGC TTATGCATAT GATTCATTAT
GTCCCGCGTA CATATCATTC GAACCAAAGT ATCTTAAATG ATGATAAAGT GAATCAAGTA
TGCGACTATA TCGAGTTACA TTTTCATGAA GATTTAAGCC TTTCAGAATT AAGCGAATAC
GTTGGGTGGT CAGAGAGCCA TCTGTCTAAA AAGTTTACAG AATCGCTAGG TGTAGGATTC
CAACATTTCT TAAATACGAC GCGAATTGAG CATGCGAAAC TCGATTTAAC ATACACAGAT
GAAACGATTA CTGATATTGC ATTGCAAAAT GGCTTTTCAA GTGCAGCGAG CTTTGCGAGA
ACATTTAAAC ACTTTACGCA TCAAACGCCT AAACAATATC GAGGTGATCG TCCAGCAATC
ACTGAAAATC AACAATCGGC ACAACATAAT TATCACGACC GTGAATTGAT ATTACTTTTA
AATGACTACA TTGAAGAAAT GAATCATTTC ATTGAAGATA TTGAAAAGAT GAACTATAAA
GAGATTGCCT TTAAACCAAC TAATCAACAA CTAAATCAAT TTAATCATAT TATTCAAGTG
GGCTATTTGA GGAATTTGCT CAATACACAG TATCAATCAC AGTTGCTTAC ATGTCATCAT
GATTTTCAAG TCAATGAAGT ATTAGCATAT GATGTGATGC CATATATTAT GAAAAAGCTC
AATGCGCCAT TCACGTATGA TGCAGAGATT TCGAATATAT TTTATGATAT CGATTTGTGT
TTAGACTTTT TATTAGATCA TAACTTTAGT CTAACCATGC ATTTGAATCA GTATGACTCA
CGAGATTATA TCGATGCATT CAAAGTATTT ATCCATCACG TTGCCCTGCA TGTCAGTCAT
AGAAAAGATT TGAAGTTCAA CTTGTATGTG ACGACATTGC ACACGTCTTT AATTGAAATG
ATTGATTATT TTAAAGCATT ATTCCCTAAT GGTGGCTTGT ACATTCACTT AGATCAAGCT
ACGGAAAGAC ATCTACCATT GTTGAAACGA CTTGAGCCAC ACATCAACCA TTTTGTATTT
GATGCCAATT CAAATGATGC TGTTGATTTT AATAAAATGA ATGATGATGA ATTTAAAACC
GCGAGTCAAA TGATTATTAA TAAAACGAAT TACCTTATCG ACTTAATGCA TCGCCATAAC
CTAAAGCGTC CACTCATTTT ACTCAATTGG AATACATTGA CGGGTGATAC ATTTATTACA
AACGGCGAAT ATTTTAGAGG TGGTATCATC ATTGAGCAAT TATTAAAATT AAGTACTAAA
GTAGAGGGTA TCGGGTATTG GTTGAATTAT GATTTGCACG TCAGTCATTG TAGAAATGAA
CGGGATTATA TGAATTCTAT TGAACTGTTT CATCAATATA ATGGAAAACG TCCGGTCTAT
TTCACGGCAT TGCTATTTAA TAAATTAACA AGCAATATTT TGTATTCTGA TGATACATGT
ATTGTCACGG GAACTGATTC AAATTTTCAA ATATTGTTAT ATGATGCAAA GCATTTTAAT
CCGTACTTAG CGTTGGACAA TCAAATGAAT ATGCGTGCAA CGGAAATGAT CCATTTGAAC
ATTAATGCCC TAGAAGACGG TATGTATAAG ATTAAACATT TTACCTTAGA TAAAGAAAAT
GGTGCGTTAT TTAATCTTTG GCGCAAACAT CATACGATAC ATGGCATGGA CAAGGACTCT
ATAGATTACG TTAATCGAAT GAGTTTTCCG AAATTAGAAG TATATGATAT AGATATCACG
GACACACTGG CATTAAACAT TAAAATGATT ACGAATGGGA TTCACTTAAT TGAAGTAAAA
CGTTACCCAA GTTCATAA
|
|---|
| Protein sequence | MQRDYLIRVE TESMPDFKRL NGLMIGFVIK GEAHIYDENN MTQCNSGDIF IINHRDLYRF
QLQQDGIICY IQFQMKYLAD KFDDAHCLYF HLTDATTTKN IHQLRNIMAR LVSTHIRHNE
LSKLTEQQLV IQLLMHMIHY VPRTYHSNQS ILNDDKVNQV CDYIELHFHE DLSLSELSEY
VGWSESHLSK KFTESLGVGF QHFLNTTRIE HAKLDLTYTD ETITDIALQN GFSSAASFAR
TFKHFTHQTP KQYRGDRPAI TENQQSAQHN YHDRELILLL NDYIEEMNHF IEDIEKMNYK
EIAFKPTNQQ LNQFNHIIQV GYLRNLLNTQ YQSQLLTCHH DFQVNEVLAY DVMPYIMKKL
NAPFTYDAEI SNIFYDIDLC LDFLLDHNFS LTMHLNQYDS RDYIDAFKVF IHHVALHVSH
RKDLKFNLYV TTLHTSLIEM IDYFKALFPN GGLYIHLDQA TERHLPLLKR LEPHINHFVF
DANSNDAVDF NKMNDDEFKT ASQMIINKTN YLIDLMHRHN LKRPLILLNW NTLTGDTFIT
NGEYFRGGII IEQLLKLSTK VEGIGYWLNY DLHVSHCRNE RDYMNSIELF HQYNGKRPVY
FTALLFNKLT SNILYSDDTC IVTGTDSNFQ ILLYDAKHFN PYLALDNQMN MRATEMIHLN
INALEDGMYK IKHFTLDKEN GALFNLWRKH HTIHGMDKDS IDYVNRMSFP KLEVYDIDIT
DTLALNIKMI TNGIHLIEVK RYPSS
|
|---|
| |