| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3638 |
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| Symbol | |
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| ID | 5077786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 266593 |
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| End bp | 267342 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640481361 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001166023 |
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| Protein GI | 146275863 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.695001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACCGA AGCATGATTT TGCGGGCGCG CACGTCCTCG TCACCGGCGG CACGAGCGGC
ATCGGCGCGG CAAGCGCCGC CCTGTTCCGC GATGCCGGCG CGCAGGTGAC GATTACCGGC
ACCCGGGGCA GCGCGGCAGA GTATGACGCC GACCTGTCGG GCTACCGCTA TCTCCAGCTC
GACATCGAGG ACAAGGACCG GATCGATGCG GTGGCGGCGG CGCTCCCCCG GCTTGACGTT
CTGGTCAACA ACGCGGGCTT CGCGCTGCCT TCGATCGGAT TGGACGAATG GGAGCCGGAC
GTGTTCGACC GCGCGGTGAA CATGCTTCTC AACGCCGCCT TCCGCATGGC GCGGCGCACC
GTCGACCTCC TGGCGCAAAG CGCGGTGCCG GGCGGCGGAT CGGTGATCGG GGTAGCATCG
ATGTCGAGCT ATTTCGGCAT ACCGGTCGTG CCCGGCTATG GCGCCGCGAA GACGGGCCTT
GTCGGCCTGA CGCGCACGAT GGCAGCCAAC TGGGGACCGC GCGGGGTGCG GGCCAATGCG
GTTGCGGCCG GTCTGACCCG CAGCAAGATG ACGGCGGGCA CCTTCGAACA GGAAGCGTGG
ACCGCGCCGA CGCTTTCGCG CACGCCGCTA GGCCGGCTGG GCGAAGCGGA CGACATCGCG
CAGGCGATCC TGTTCCTGGC AAGCCCCGCC GCGTCGTGGA TCACGGGCCA GACGCTGGCC
GTGGACGGCG GCTACACGAT TTCGGGATAA
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| Protein sequence | MGPKHDFAGA HVLVTGGTSG IGAASAALFR DAGAQVTITG TRGSAAEYDA DLSGYRYLQL
DIEDKDRIDA VAAALPRLDV LVNNAGFALP SIGLDEWEPD VFDRAVNMLL NAAFRMARRT
VDLLAQSAVP GGGSVIGVAS MSSYFGIPVV PGYGAAKTGL VGLTRTMAAN WGPRGVRANA
VAAGLTRSKM TAGTFEQEAW TAPTLSRTPL GRLGEADDIA QAILFLASPA ASWITGQTLA
VDGGYTISG
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