| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1522 |
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| Symbol | |
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| ID | 3917197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1566401 |
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| End bp | 1567804 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640444263 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_496797 |
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| Protein GI | 87199540 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTGGG AAATCCGCCG CAGGAACGTA AAGCCAAGAT CGCCCATCGC GGTACCGGCC
CTGCCTTTGC CCGGCGATAC GATGTTGACC CCAGACAGGA CGGACGAGGC TCAGGTCGGT
GCCGCTCCCG CCGCAAATGA CGTTCTGCTT GGCATCAAGG TCGACATCCA TCGAGAGCTT
CTCGACCGCG TCAATCTGGC GGCCATCGAA AAGCTTTCGC GAACCGACCT GGTTCGTGAA
CTCTCTGACA TCATCGGCGG CATCCTGACC GAACGGAATA TCGCGCTCAA TCGTGTCGAG
CGCGAAGATC TCGTTGAAGA CATCGTCGAT GAACTGGTCG GCCTCGGTCC GCTTGAGCCA
CTCATCAAGG ATGACAGCAT ATCGGACATT CTCGTCAACG GTTACGAGAC AGTTTTCGTC
GAACGCGGCG GCAAACTGCA GCGAGTATCG ACGCGGTTCC AGGATGAGCG GCACCTCCTG
CGCATAATCC AGAAGATTGT CAGTGCCGTA GGTCGCCGCG TCGACGAATC CTCGCCATTT
GTCGATGCGA GACTGGCGGA CGGTTCCCGC GTAAATGCGA TCGTTGCGCC GCTTGCTATC
GACGGATCAC TGTTGTCGAT CCGCAAGTTC TCCAAGAAGC CGATCAGCAT GGCCCGAATG
ATCGAGATTG GCAGCTTGTC AGAACCAATG GCGATTCTGC TCAAGGCCGT GGTTGAAGGT
CGTCTCAACA TCATCATCTC TGGCGGCACC GGCTCGGGCA AGACGACGAT GCTCAATGCC
TTGTCTTCGT ACATCGATGG CACCGAACGT ATCGTCACGA TCGAGGACTC GGCCGAACTT
CAACTCCAGC AGGAGCACGT TGCGCGTTTG GAGACGCGCC CCCCCAACAT CGAGGGGCGC
GGTGAGGTCA GCCAACGCGA TCTGGTCAAG AATGCCCTGC GCATGCGGCC TGACCGGATC
ATCCTGGGGG AATGCCGTGC GGGCGAAGCC TTCGATATGC TTCAGGCGAT GAACACGGGG
CATGACGGCT CGATGACGAC GGTACATGCA AACACTCCGC GCGATGCGCT GACGCGTATT
GAACAGATGG TTGGCATGAG CGGCATCGAT ATTGCGCCTC GTTCGGTCCG GGCCCAGATC
GGCTCGGCCG TCAACGTCGT GATCCAGATC GGCCGTCTTT CCGACGGTCG ACGCAAGACT
CTCAGCATTT CCGAATTGAC CGGGATGGAG GGGGAAACGA TCACCATGCA GGAGATTTTC
CGCTTCAACC AGCGTGGGCG CGACGAGCTC GGCAACGTCA TTGGCCATTT CGAAGCGACC
GGCATCCGCC CCCGGTTCGC TGCACGCCTC GAGGCGAGTG GCATCCACCT CGCCGCCGAT
CTATTCAAGC CGACGATGGG GTGA
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| Protein sequence | MNWEIRRRNV KPRSPIAVPA LPLPGDTMLT PDRTDEAQVG AAPAANDVLL GIKVDIHREL
LDRVNLAAIE KLSRTDLVRE LSDIIGGILT ERNIALNRVE REDLVEDIVD ELVGLGPLEP
LIKDDSISDI LVNGYETVFV ERGGKLQRVS TRFQDERHLL RIIQKIVSAV GRRVDESSPF
VDARLADGSR VNAIVAPLAI DGSLLSIRKF SKKPISMARM IEIGSLSEPM AILLKAVVEG
RLNIIISGGT GSGKTTMLNA LSSYIDGTER IVTIEDSAEL QLQQEHVARL ETRPPNIEGR
GEVSQRDLVK NALRMRPDRI ILGECRAGEA FDMLQAMNTG HDGSMTTVHA NTPRDALTRI
EQMVGMSGID IAPRSVRAQI GSAVNVVIQI GRLSDGRRKT LSISELTGME GETITMQEIF
RFNQRGRDEL GNVIGHFEAT GIRPRFAARL EASGIHLAAD LFKPTMG
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