Gene Sare_4987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4987 
Symbol 
ID5706136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5656531 
End bp5657238 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content65% 
IMG OID641274380 
Productglycosyl transferase family protein 
Protein accessionYP_001539721 
Protein GI159040468 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.278061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000170854 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAGCTCT CGATCCTCAT GCCGGTCTAC AACGAGGAAG AACGCATCGC GGACGCCTTG 
AAGCAGGCGC TCGCGGTGGA CTATCCGTGC GAGATCGAGC TCGTCGTGGT CGACGACGGA
AGTCGGGACG GCACCGGCGA GATCCTGGGT CGGGCCGACG ACTCCCGAGT CCGTGTGATC
ACCCACCCGC GTAACTCCGG CAAGGGCGCG GCCATCCGAA CGGCGGTCGA CAACGCCGAG
GGTGAGTACA TGGTGATCCT CGACGCCGAC CTGGAATACG ACCCGCAGGA CATTTCCAAG
CTGCTCGCAC CGGTCCTCGA CGGACGGGCC ACGGTCGTCT ACGGCAATCG CACCTTCGGC
AGCCACAGCG CGTACAGCTT CTGGTATGTG ATGGGCAACA AGGGCGTCAC GATGGTGGCC
AACGTGCTGT TCAACTCGTA CATCGGCGAC CTGGAGACCT GTTTCAAGCT GATGCCGATC
GAGTTGTACC GTTCCCTGGA GATCCACTCG CGGGGTTTCG GTATGGAGGC GGAGGTGACC
GGCAAGCTGC TGCGCCGCCG GATCCGTCCA TACGAGGTGC CGATCAGCTA CCGGGCCCGC
GGCCGCGAGG AGGGTAAGAA GATCACCTGG AAGGACGGGG TCGAGGCGGT CTGGATCCTC
AGCCGGGAGC GGACCCGGCG TCGTCCTCCG GGCACCGCTC CCCGCTGA
 
Protein sequence
MKLSILMPVY NEEERIADAL KQALAVDYPC EIELVVVDDG SRDGTGEILG RADDSRVRVI 
THPRNSGKGA AIRTAVDNAE GEYMVILDAD LEYDPQDISK LLAPVLDGRA TVVYGNRTFG
SHSAYSFWYV MGNKGVTMVA NVLFNSYIGD LETCFKLMPI ELYRSLEIHS RGFGMEAEVT
GKLLRRRIRP YEVPISYRAR GREEGKKITW KDGVEAVWIL SRERTRRRPP GTAPR