Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4987 |
Symbol | |
ID | 5706136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5656531 |
End bp | 5657238 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641274380 |
Product | glycosyl transferase family protein |
Protein accession | YP_001539721 |
Protein GI | 159040468 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.278061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000170854 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAGCTCT CGATCCTCAT GCCGGTCTAC AACGAGGAAG AACGCATCGC GGACGCCTTG AAGCAGGCGC TCGCGGTGGA CTATCCGTGC GAGATCGAGC TCGTCGTGGT CGACGACGGA AGTCGGGACG GCACCGGCGA GATCCTGGGT CGGGCCGACG ACTCCCGAGT CCGTGTGATC ACCCACCCGC GTAACTCCGG CAAGGGCGCG GCCATCCGAA CGGCGGTCGA CAACGCCGAG GGTGAGTACA TGGTGATCCT CGACGCCGAC CTGGAATACG ACCCGCAGGA CATTTCCAAG CTGCTCGCAC CGGTCCTCGA CGGACGGGCC ACGGTCGTCT ACGGCAATCG CACCTTCGGC AGCCACAGCG CGTACAGCTT CTGGTATGTG ATGGGCAACA AGGGCGTCAC GATGGTGGCC AACGTGCTGT TCAACTCGTA CATCGGCGAC CTGGAGACCT GTTTCAAGCT GATGCCGATC GAGTTGTACC GTTCCCTGGA GATCCACTCG CGGGGTTTCG GTATGGAGGC GGAGGTGACC GGCAAGCTGC TGCGCCGCCG GATCCGTCCA TACGAGGTGC CGATCAGCTA CCGGGCCCGC GGCCGCGAGG AGGGTAAGAA GATCACCTGG AAGGACGGGG TCGAGGCGGT CTGGATCCTC AGCCGGGAGC GGACCCGGCG TCGTCCTCCG GGCACCGCTC CCCGCTGA
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Protein sequence | MKLSILMPVY NEEERIADAL KQALAVDYPC EIELVVVDDG SRDGTGEILG RADDSRVRVI THPRNSGKGA AIRTAVDNAE GEYMVILDAD LEYDPQDISK LLAPVLDGRA TVVYGNRTFG SHSAYSFWYV MGNKGVTMVA NVLFNSYIGD LETCFKLMPI ELYRSLEIHS RGFGMEAEVT GKLLRRRIRP YEVPISYRAR GREEGKKITW KDGVEAVWIL SRERTRRRPP GTAPR
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