Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0096 |
Symbol | |
ID | 5707066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 107445 |
End bp | 108194 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641269622 |
Product | LamB/YcsF family protein |
Protein accession | YP_001535022 |
Protein GI | 159035769 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000523388 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATCTCA ACGCTGATCT CGGTGAAGGG TTCGGCGTCT GGCAGCTCGG TGATGACGCC GCGTTGCTGG ACCTGGTGAC CTCCGCCAAC GTCGCCTGCG GCTTCCACGC TGGAGACGCC GTCACCATGC GCCGGGTCTG CGCTGGGGCC GCCGAGCGGG GTGTTGCGGT GGGCGCGCAG GTCGGCTACC GGGATCTGGT CGGCTTCGGG CGGCGCCCGA TCGCATACGA GTTCGCCGAG CTACGTGACG AGATCCTCTA CCAACTCGGC GCCCTCGACG GGTTCTGTCG GGTCGTCGGG ACGAGGGTCC GGTACCTCAA GCCGCACGGC GCGCTCTACC ACGCCGTCGC CCACGACGAG TCCCAGGCGG CGGCGGTGGT CGCCGCGGTC GCCGAGTACG ACGACCAGCT TCCGCTGCTC TGCCCGCCCG GCTCGGTACT CGCCCAGCTC GCGACCGGTG CGGGGCTCCG GGCCGTCGGC GAGGGCTTCG CCGACCGGGG CTACCTGCCC AACGGCAGGC TGGTGCCCCG GGGCGCCCCG AACGCGCTGA TCACCGACCC GGAGCTGATG GCCAGGCAGG CCGTCCGGAT CGCCACCGAC CGGACCGTGG TGGCGGTCGA CGGCAGCGTG ATTCCGTGCC CGGCCCAGTC GATCTGCCTG CACGGCGACA CCCCAGGTGC GGTGCGCTGC GCCGAGCTGA TCCGCGCGGT GCTGGTCGAC GCGGGAGTCC CACTTTCCCC GTTCACGTGA
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Protein sequence | MDLNADLGEG FGVWQLGDDA ALLDLVTSAN VACGFHAGDA VTMRRVCAGA AERGVAVGAQ VGYRDLVGFG RRPIAYEFAE LRDEILYQLG ALDGFCRVVG TRVRYLKPHG ALYHAVAHDE SQAAAVVAAV AEYDDQLPLL CPPGSVLAQL ATGAGLRAVG EGFADRGYLP NGRLVPRGAP NALITDPELM ARQAVRIATD RTVVAVDGSV IPCPAQSICL HGDTPGAVRC AELIRAVLVD AGVPLSPFT
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