| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2882 |
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| Symbol | |
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| ID | 4605129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3422843 |
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| End bp | 3423379 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639782293 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_928754 |
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| Protein GI | 119776014 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG4635] Flavodoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAAAA CTCTTATTCT TTTTTCCACC GTCCATGGTC AGACCCGCAA GATTTGCGAT
CGCATTGCCG AGGTGATGCG CGGCCTTGAC CACGAGGTGA CCCTGATGCC TCTGGATCAG
GCGCCGAGTC TGGAGGGATT CGACAAGGTA GTGTTGGGGG CCAGCATTCG CCATGGCAAA
CACAACAGCG CCGTGTACCA GTTTATCGAG CAAAATCTGG ACGCGCTGCG AAGCCGTGCC
GGTGCCTTTT TCTCTGTCAG TCTGGTGGCC CGAAAGCAAG CCAAGAATAC GGCGGCCACC
AATCCCTATA TGCAGGACTT TTTAGCTAAA TCTCCCTGGC GCCCTGAGTT GCTGGAGGTA
TTTGGCGGTA ACCTGCATTA TCAGGGCTAT AGCGCCATGG ATAGAAATAT CATCAGATTT
ATCATGTGGT TGACCAAGGG ACCAACCGAC CCCAATACCA AGGTGGAGTA CACCGACTGG
CAAAAAGTTG ATAGGTTTTC CCGAGAGATA GCATCTATGG AAATTTTATC CCGATGA
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| Protein sequence | MSKTLILFST VHGQTRKICD RIAEVMRGLD HEVTLMPLDQ APSLEGFDKV VLGASIRHGK
HNSAVYQFIE QNLDALRSRA GAFFSVSLVA RKQAKNTAAT NPYMQDFLAK SPWRPELLEV
FGGNLHYQGY SAMDRNIIRF IMWLTKGPTD PNTKVEYTDW QKVDRFSREI ASMEILSR
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