Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2828 |
Symbol | rpmA |
ID | 4605075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3366537 |
End bp | 3366791 |
Gene Length | 255 bp |
Protein Length | 84 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639782239 |
Product | 50S ribosomal protein L27 |
Protein accession | YP_928700 |
Protein GI | 119775960 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0211] Ribosomal protein L27 |
TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000113295 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.198807 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACACA AAAAAGCTGG CGGTTCTACT CGTAACGGCC GCGATTCAGA AAGCAAACGT CTTGGTGTAA AGCGCTTCGG CGGCGAATCA GTTCTGGCTG GTAACATCAT TGTTCGTCAG CGTGGCACCA AGTTCCACGC CGGTGTGAAC GTAGGTATTG GTCGTGACCA CACCCTGTTC GCCCTGACTG ACGGCAAAGT TAAGTTCGAA GTTAAAGGTC CTAACAACCG TAAGTTTGTT AGCATCGAAG ACTAA
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Protein sequence | MAHKKAGGST RNGRDSESKR LGVKRFGGES VLAGNIIVRQ RGTKFHAGVN VGIGRDHTLF ALTDGKVKFE VKGPNNRKFV SIED
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